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Genomic databases

Search Engine for Antimicrobial Resistance: A Cloud Compatible Pipeline and Web Interface for Rapidly Detecting Antimicrobial Resistance Genes Directly from Sequence Data

Will Rowe, Kate S. Baker, David Verner-Jeffreys, Craig Baker-Austin, Jim J. Ryan, Duncan Maskell, Gareth Pearce

published 21 Jul 2015

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BGD: A Database of Bat Genomes

Jianfei Fang, Xuan Wang, Shuo Mu, Shuyi Zhang, Dong Dong

published 25 Jun 2015

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zflncRNApedia: A Comprehensive Online Resource for Zebrafish Long Non-Coding RNAs

Heena Dhiman, Shruti Kapoor, Ambily Sivadas, Sridhar Sivasubbu, Vinod Scaria

published 11 Jun 2015

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Dietary MicroRNA Database (DMD): An Archive Database and Analytic Tool for Food-Borne microRNAs

Kevin Chiang, Jiang Shu, Janos Zempleni, Juan Cui

published 01 Jun 2015

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CoMeta: Classification of Metagenomes Using k-mers

Jolanta Kawulok, Sebastian Deorowicz

published 17 Apr 2015

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Construction of an Ortholog Database Using the Semantic Web Technology for Integrative Analysis of Genomic Data

Hirokazu Chiba, Hiroyo Nishide, Ikuo Uchiyama

published 13 Apr 2015

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De novo Assembly and Transcriptomic Profiling of the Grazing Response in Stipa grandis

Dongli Wan, Yongqing Wan, Xiangyang Hou, Weibo Ren, Yong Ding, Rula Sa

published 13 Apr 2015

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T346Hunter: A Novel Web-Based Tool for the Prediction of Type III, Type IV and Type VI Secretion Systems in Bacterial Genomes

Pedro Manuel Martínez-García, Cayo Ramos, Pablo Rodríguez-Palenzuela

published 13 Apr 2015

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Mapsnp: An R Package to Plot a Genomic Map for Single Nucleotide Polymorphisms

Fuquan Zhang, Yong Xu, Hongbao Cao, Chunhui Jin, Zaohuo Cheng, Guoqiang Wang, Yin Yao Shugart

published 08 Apr 2015

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Identification of New Genomospecies in the Mycobacterium terrae Complex

Yun Fong Ngeow, Yan Ling Wong, Joon Liang Tan, Kar Wai Hong, Hien Fuh Ng, Bee Lee Ong, Kok Gan Chan

published 01 Apr 2015

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Genome-Wide Identification, Characterization and Evolutionary Analysis of Long Intergenic Noncoding RNAs in Cucumber

Zhiqiang Hao, Chunyan Fan, Tian Cheng, Ya Su, Qiang Wei, Guanglin Li

published 23 Mar 2015

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Comparative Transcriptome Analysis of Genes Involved in Anthocyanin Biosynthesis in the Red and Yellow Fruits of Sweet Cherry (Prunus avium L.)

Hairong Wei, Xin Chen, Xiaojuan Zong, Huairui Shu, Dongsheng Gao, Qingzhong Liu

published 23 Mar 2015

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De Novo Transcriptome Assembly of Pummelo and Molecular Marker Development

Mei Liang, Xiaoming Yang, Hang Li, Shiying Su, Hualin Yi, Lijun Chai, Xiuxin Deng

published 23 Mar 2015

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