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Genome annotation

Epigenome wide association study of response to methotrexate in early rheumatoid arthritis patients

Helen R. Gosselt, Costanza L. Vallerga, Pooja R. Mandaviya, Erik Lubberts, Johanna M. W. Hazes, Robert de Jonge, Sandra G. Heil

published 10 Mar 2021

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Construction of a reference transcriptome for the analysis of male sterility in sugi (Cryptomeria japonica D. Don) focusing on MALE STERILITY 1 (MS1)

Fu-Jin Wei, Saneyoshi Ueno, Tokuko Ujino-Ihara, Maki Saito, Yoshihiko Tsumura, Yuumi Higuchi, Satoko Hirayama, Junji Iwai, Tetsuji Hakamata, Yoshinari Moriguchi

published 25 Feb 2021

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High throughput detection and genetic epidemiology of SARS-CoV-2 using COVIDSeq next-generation sequencing

Rahul C. Bhoyar, Abhinav Jain, Paras Sehgal, Mohit Kumar Divakar, Disha Sharma, Mohamed Imran, Bani Jolly, Gyan Ranjan, Mercy Rophina, Sumit Sharma, Sanjay Siwach, Kavita Pandhare, Swayamprabha Sahoo, Maheswata Sahoo, Ananya Nayak, Jatindra Nath Mohanty, Jayashankar Das, Sudhir Bhandari, Sandeep K. Mathur, Anshul Kumar, Rahul Sahlot, Pallavali Rojarani, Juturu Vijaya Lakshmi, Avileli Surekha, Pulala Chandra Sekhar, Shelly Mahajan, Shet Masih, Pawan Singh, Vipin Kumar, Blessy Jose, Vidur Mahajan, Vivek Gupta, Rakesh Gupta, Prabhakar Arumugam, Anjali Singh, Ananya Nandy, Ragavendran P. V., Rakesh Mohan Jha, Anupama Kumari, Sheetal Gandotra, Vivek Rao, Mohammed Faruq, Sanjeev Kumar, Betsy Reshma G., Narendra Varma G., Shuvra Shekhar Roy, Antara Sengupta, Sabyasachi Chattopadhyay, Khushboo Singhal, Shalini Pradhan, Diksha Jha, Salwa Naushin, Saruchi Wadhwa, Nishu Tyagi, Mukta Poojary, Vinod Scaria, Sridhar Sivasubbu

published 17 Feb 2021

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Mycobacterium smegmatis does not display functional redundancy in nitrate reductase enzymes

Nicole C. Cardoso, Andrea O. Papadopoulos, Bavesh D. Kana

published 20 Jan 2021

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InsectOR—Webserver for sensitive identification of insect olfactory receptor genes from non-model genomes

Snehal Dilip Karpe, Vikas Tiwari, Sowdhamini Ramanathan

published 19 Jan 2021

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DALIA- a comprehensive resource of Disease Alleles in Arab population

Aastha Vatsyayan, Parul Sharma, Shrey Gupta, Sumiti Sandhu, Seetha Lakshmi Venu, Vandana Sharma, Bouabid Badaoui, Kaidi Azedine, Serti Youssef, Anna Rajab, Alaaeldin Fayez, Seema Madinur, Anop Ranawat, Kavita Pandhare, Srinivasan Ramachandran, Sridhar Sivasubbu, Vinod Scaria

published 13 Jan 2021

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Novel candidates of pathogenic variants of the BRCA1 and BRCA2 genes from a dataset of 3,552 Japanese whole genomes (3.5KJPNv2)

Hideki Tokunaga, Keita Iida, Atsushi Hozawa, Soichi Ogishima, Yoh Watanabe, Shogo Shigeta, Muneaki Shimada, Yumi Yamaguchi-Kabata, Shu Tadaka, Fumiki Katsuoka, Shin Ito, Kazuki Kumada, Yohei Hamanaka, Nobuo Fuse, Kengo Kinoshita, Masayuki Yamamoto, Nobuo Yaegashi, Jun Yasuda

published 11 Jan 2021

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Metagenomics survey unravels diversity of biogas microbiomes with potential to enhance productivity in Kenya

Samuel Mwangangi Muturi, Lucy Wangui Muthui, Paul Mwangi Njogu, Justus Mong’are Onguso, Francis Nyamu Wachira, Stephen Obol Opiyo, Roger Pelle

published 04 Jan 2021

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Quantifying influence of human choice on the automated detection of Drosophila behavior by a supervised machine learning algorithm

Xubo Leng, Margot Wohl, Kenichi Ishii, Pavan Nayak, Kenta Asahina

published 16 Dec 2020

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Two-step multi-omics modelling of drug sensitivity in cancer cell lines to identify driving mechanisms

Nina Kusch, Andreas Schuppert

published 23 Nov 2020

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The small RNA locus map for Chlamydomonas reinhardtii

Sebastian Y. Müller, Nicholas E. Matthews, Adrian A. Valli, David C. Baulcombe

published 19 Nov 2020

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A haplotype-phased genome of wheat stripe rust pathogen Puccinia striiformis f. sp. tritici, race PST-130 from the Western USA

Hans Vasquez-Gross, Sukhwinder Kaur, Lynn Epstein, Jorge Dubcovsky

published 11 Nov 2020

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netboxr: Automated discovery of biological process modules by network analysis in R

Eric Minwei Liu, Augustin Luna, Guanlan Dong, Chris Sander

published 02 Nov 2020

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