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Genome annotation

Longer First Introns Are a General Property of Eukaryotic Gene Structure

Keith R. Bradnam, Ian Korf

published 29 Aug 2008

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Improved Elucidation of Biological Processes Linked to Diabetic Nephropathy by Single Probe-Based Microarray Data Analysis

Clemens D. Cohen, Maja T. Lindenmeyer, Felix Eichinger, Alexander Hahn, Martin Seifert, Anton G. Moll, Holger Schmid, Eva Kiss, Elisabeth Gröne, Hermann-Josef Gröne, Matthias Kretzler, Thomas Werner, Peter J. Nelson

published 13 Aug 2008

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Identify Alternative Splicing Events Based on Position-Specific Evolutionary Conservation

Liang Chen, Sika Zheng

published 30 Jul 2008

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Functional Annotation and Identification of Candidate Disease Genes by Computational Analysis of Normal Tissue Gene Expression Data

Laura Miozzi, Rosario Michael Piro, Fabio Rosa, Ugo Ala, Lorenzo Silengo, Ferdinando Di Cunto, Paolo Provero

published 18 Jun 2008

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Alternative Promoters Influence Alternative Splicing at the Genomic Level

Dedong Xin, Landian Hu, Xiangyin Kong

published 18 Jun 2008

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De-Orphaning the Structural Proteome through Reciprocal Comparison of Evolutionarily Important Structural Features

R. Matthew Ward, Serkan Erdin, Tuan A. Tran, David M. Kristensen, Andreas Martin Lisewski, Olivier Lichtarge

published 07 May 2008

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Comparative Analysis of Acinetobacters: Three Genomes for Three Lifestyles

David Vallenet, Patrice Nordmann, Valérie Barbe, Laurent Poirel, Sophie Mangenot, Elodie Bataille, Carole Dossat, Shahinaz Gas, Annett Kreimeyer, Patricia Lenoble, Sophie Oztas, Julie Poulain, Béatrice Segurens, Catherine Robert, Chantal Abergel, Jean-Michel Claverie, Didier Raoult, Claudine Médigue, Jean Weissenbach, Stéphane Cruveiller

published 19 Mar 2008

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Protein Function Assignment through Mining Cross-Species Protein-Protein Interactions

Xue-wen Chen, Mei Liu, Robert Ward

published 06 Feb 2008

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Gene Characterization Index: Assessing the Depth of Gene Annotation

Danielle Kemmer, Raf M. Podowski, Dimas Yusuf, Jochen Brumm, Warren Cheung, Claes Wahlestedt, Boris Lenhard, Wyeth W. Wasserman

published 23 Jan 2008

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An Improved, Bias-Reduced Probabilistic Functional Gene Network of Baker's Yeast, Saccharomyces cerevisiae

Insuk Lee, Zhihua Li, Edward M. Marcotte

published 03 Oct 2007

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Modeling Insertional Mutagenesis Using Gene Length and Expression in Murine Embryonic Stem Cells

Alex S. Nord, Karen Vranizan, Whittemore Tingley, Alexander C. Zambon, Kristina Hanspers, Loren G. Fong, Yan Hu, Peter Bacchetti, Thomas E. Ferrin, Patricia C. Babbitt, Scott W. Doniger, William C. Skarnes, Stephen G. Young, Bruce R. Conklin

published 18 Jul 2007

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A Full-Genomic Sequence-Verified Protein-Coding Gene Collection for Francisella tularensis

Tal Murthy, Andreas Rolfs, Yanhui Hu, Zhenwei Shi, Jacob Raphael, Donna Moreira, Fontina Kelley, Seamus McCarron, Daniel Jepson, Elena Taycher, Dongmei Zuo, Stephanie E. Mohr, Mauricio Fernandez, Leonardo Brizuela, Joshua LaBaer

published 27 Jun 2007

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Probabilistic Protein Function Prediction from Heterogeneous Genome-Wide Data

Naoki Nariai, Eric D. Kolaczyk, Simon Kasif

published 28 Mar 2007

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