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Genome annotation

Enzymes Are Enriched in Bacterial Essential Genes

Feng Gao, Randy Ren Zhang

published 28 Jun 2011

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Genome Assembly Has a Major Impact on Gene Content: A Comparison of Annotation in Two Bos Taurus Assemblies

Liliana Florea, Alexander Souvorov, Theodore S. Kalbfleisch, Steven L. Salzberg

published 22 Jun 2011

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A Compendium of Canine Normal Tissue Gene Expression

Joseph Briggs, Melissa Paoloni, Qing-Rong Chen, Xinyu Wen, Javed Khan, Chand Khanna

published 31 May 2011

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Combining Computational Prediction of Cis-Regulatory Elements with a New Enhancer Assay to Efficiently Label Neuronal Structures in the Medaka Fish

Emmanuel Mongin, Thomas O. Auer, Franck Bourrat, Franziska Gruhl, Ken Dewar, Mathieu Blanchette, Joachim Wittbrodt, Laurence Ettwiller

published 27 May 2011

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Evaluating the Fidelity of De Novo Short Read Metagenomic Assembly Using Simulated Data

Miguel Pignatelli, Andrés Moya

published 23 May 2011

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Domestication of Transposable Elements into MicroRNA Genes in Plants

Yang Li, Chaoqun Li, Jie Xia, Youxin Jin

published 03 May 2011

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Representative Proteomes: A Stable, Scalable and Unbiased Proteome Set for Sequence Analysis and Functional Annotation

Chuming Chen, Darren A. Natale, Robert D. Finn, Hongzhan Huang, Jian Zhang, Cathy H. Wu, Raja Mazumder

published 27 Apr 2011

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Using Functional Annotation for the Empirical Determination of Bayes Factors for Genome-Wide Association Study Analysis

Jo Knight, Michael R. Barnes, Gerome Breen, Michael E. Weale

published 27 Apr 2011

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An Integrated Approach for Finding Overlooked Genes in Shigella

Junping Peng, Jian Yang, Qi Jin

published 05 Apr 2011

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Transcriptome Analysis of Female and Male Xiphophorus maculatus Jp 163 A

Ziping Zhang, Yilei Wang, Shuhong Wang, Jingtao Liu, Wesley Warren, Makedonka Mitreva, Ronald B. Walter

published 05 Apr 2011

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Predicting Protein Phenotypes Based on Protein-Protein Interaction Network

Lele Hu, Tao Huang, Xiao-Jun Liu, Yu-Dong Cai

published 10 Mar 2011

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HMMerThread: Detecting Remote, Functional Conserved Domains in Entire Genomes by Combining Relaxed Sequence-Database Searches with Fold Recognition

Charles Richard Bradshaw, Vineeth Surendranath, Robert Henschel, Matthias Stefan Mueller, Bianca Hermine Habermann

published 10 Mar 2011

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TargetMine, an Integrated Data Warehouse for Candidate Gene Prioritisation and Target Discovery

Yi-An Chen, Lokesh P. Tripathi, Kenji Mizuguchi

published 08 Mar 2011

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