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Genome annotation

Automatic Assignment of Prokaryotic Genes to Functional Categories Using Literature Profiling

Raul Torrieri, Francislon S. Oliveira, Guilherme Oliveira, Roney S. Coimbra

Analysis of Litopenaeus vannamei Transcriptome Using the Next-Generation DNA Sequencing Technique

Chaozheng Li, Shaoping Weng, [ ... ], Xiaopeng Xu

The Transcriptome Profile of the Mosquito Culex quinquefasciatus following Permethrin Selection

William R. Reid, Lee Zhang, Feng Liu, Nannan Liu

MK4MDD: A Multi-Level Knowledge Base and Analysis Platform for Major Depressive Disorder

Liyuan Guo, Weina Zhang, [ ... ], Jing Wang

Evaluation of Different Reference Based Annotation Strategies Using RNA-Seq – A Case Study in Drososphila pseudoobscura

Nicola Palmieri, Viola Nolte, [ ... ], Christian Schlötterer

GenoSets: Visual Analytic Methods for Comparative Genomics

Aurora A. Cain, Robert Kosara, Cynthia J. Gibas

MyDas, an Extensible Java DAS Server

Gustavo A. Salazar, Leyla J. García, [ ... ], Henning Hermjakob

Insect Innate Immunity Database (IIID): An Annotation Tool for Identifying Immune Genes in Insect Genomes

Robert M. Brucker, Lisa J. Funkhouser, [ ... ], Seth R. Bordenstein

Theoretical Prediction and Experimental Verification of Protein-Coding Genes in Plant Pathogen Genome Agrobacterium tumefaciens Strain C58

Qian Wang, Yang Lei, [ ... ], Ling-Ling Chen

Comparative Transcriptome Analyses of Deltamethrin-Resistant and -Susceptible Anopheles gambiae Mosquitoes from Kenya by RNA-Seq

Mariangela Bonizzoni, Yaw Afrane, [ ... ], Guiyun Yan

Transposable Elements in TDP-43-Mediated Neurodegenerative Disorders

Wanhe Li, Ying Jin, [ ... ], Josh Dubnau

Genome-Scale Reconstruction and Analysis of the Metabolic Network in the Hyperthermophilic Archaeon Sulfolobus Solfataricus

Thomas Ulas, S. Alexander Riemer, [ ... ], Dietmar Schomburg

Comparative Metagenomics of Toxic Freshwater Cyanobacteria Bloom Communities on Two Continents

Morgan M. Steffen, Zhou Li, [ ... ], Steven W. Wilhelm

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