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Gene expression

Ortholog transfer stress test: Regulatory edge conservation across species, tissues, and evolutionary distance

Ihor Kendiukhov

A comparative study of CDO1 promoter methylation in gastric cancer and H. pylori-associated chronic gastritis: Implications for diagnostic performance

Selin Kankaya, Metehan Karatas, [ ... ], Yildiz Dincer

Integration of RNA-seq and scRNA-seq to investigate the role of cell cycle-related biomarkers in sepsis

Mei-Ping Zheng, Yan-Ling Du, [ ... ], Xiao-Tan Gao

Drug sensitivity prediction across cancer types using graph isomorphism networks and biological pathway features: A dual-branch deep learning approach

Shuang Li, Quanzhong Yang, [ ... ], Weikai Zhang

Effects of neem extract on Artemia franciscana: Insights from high-throughput transcriptomics and phenotypic analysis

Rodolfo Farlora, Paulina Bustos, [ ... ], Kathleen Whitlock

Analyzing an organism’s sensors using Maximum Entropy (MaxEnt) models with bias, variance, and confusion matrices

Christopher Wang, Elianna Schimke, [ ... ], Sarah Marzen

ProteoMapper: Alignment-aware identification and quantitative analysis of contextual motif–domain patterns in protein families

Sifullah Mahmud Sefa, Joyeeta Sarkar, Arif Hasan Khan Robin, Machbah Uddin

Dual regulatory mechanisms of YGP1 expression in response to glucose availability in Saccharomyces cerevisiae

Megumi Sato, Kaoru Irie, [ ... ], Kenji Irie

Induction of osteogenic differentiation of MSCs by GSK3β knockdown through GSK3β siRNAs transfection

Elena V. Galitsyna, Anastasiia A. Buianova, [ ... ], Dmitriy V. Goldshtein

Identification of senescence-related genes in diagnosing idiopathic pulmonary fibrosis via integrating bioinformatics analysis and machine learning

Chenchun Ding, Ziwei Ye, Pu Zeng, Weibin Chen

HIF-1α inhibits the TLR4/NF-κB signaling pathway and modulates intestinal flora in diarrhea-predominant irritable bowel syndrome

Xing He, Dechun Wang, [ ... ], Jun Tang

Uncovering the molecular landscape of young-onset diffuse gastric cancer: A relieff-based feature selection analysis on RNA-Seq data

Zahra Khalili Azni, Matia Sadat Borhani, [ ... ], Maryam Pasandideh Arjmand

Splicing factor HNRNPD and alternative splicing of MAP4K4 are associated with cell apoptosis and immune microenvironment features in Wilms’ tumor

Chunlei Yang, Man Liao, [ ... ], Gang Li

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