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Gene expression

Systematic Comparison of Constitutive Promoters and the Doxycycline-Inducible Promoter

Jane Yuxia Qin, Li Zhang, [ ... ], Bruce T. Lahn

Novel Markers to Delineate Murine M1 and M2 Macrophages

Kyle A. Jablonski, Stephanie A. Amici, [ ... ], Mireia Guerau-de-Arellano

RNA-Seq differential expression analysis: An extended review and a software tool

Juliana Costa-Silva, Douglas Domingues, Fabricio Martins Lopes

Relaxation Response Induces Temporal Transcriptome Changes in Energy Metabolism, Insulin Secretion and Inflammatory Pathways

Manoj K. Bhasin, Jeffery A. Dusek, [ ... ], Towia A. Libermann

REVIGO Summarizes and Visualizes Long Lists of Gene Ontology Terms

Fran Supek, Matko Bošnjak, Nives Škunca, Tomislav Šmuc

The Precision-Recall Plot Is More Informative than the ROC Plot When Evaluating Binary Classifiers on Imbalanced Datasets

Takaya Saito, Marc Rehmsmeier

Resistance Exercise Reverses Aging in Human Skeletal Muscle

Simon Melov, Mark A. Tarnopolsky, [ ... ], Alan Hubbard

Comparison of RNA-Seq and Microarray in Transcriptome Profiling of Activated T Cells

Shanrong Zhao, Wai-Ping Fung-Leung, [ ... ], Xuejun Liu

Molecular Profiling of Breast Cancer Cell Lines Defines Relevant Tumor Models and Provides a Resource for Cancer Gene Discovery

Jessica Kao, Keyan Salari, [ ... ], Jonathan R. Pollack

A Modular Cloning System for Standardized Assembly of Multigene Constructs

Ernst Weber, Carola Engler, [ ... ], Sylvestre Marillonnet

Genomic Counter-Stress Changes Induced by the Relaxation Response

Jeffery A. Dusek, Hasan H. Otu, [ ... ], Towia A. Libermann

Inferring Regulatory Networks from Expression Data Using Tree-Based Methods

Vân Anh Huynh-Thu, Alexandre Irrthum, Louis Wehenkel, Pierre Geurts

Reversal of Diabetic Nephropathy by a Ketogenic Diet

Michal M. Poplawski, Jason W. Mastaitis, [ ... ], Charles V. Mobbs

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