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Fungal genomics

Development of a multiplex ddPCR assay for simultaneous absolute quantification of bacterial, fungal, and human DNA

Guohong Huang, Torrey L. Gallagher, Gregory J. Tsongalis, Joel A. Lefferts

published 20 Feb 2026

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Multi-locus phylogenetic network analysis of Ampelomyces mycoparasites isolated from diverse powdery mildews in Australia and the generation of two de novo genome assemblies

Lauren Goldspink, Alexandros G. Sotiropoulos, Alexander Idnurm, Gavin J. Ash, John D. W. Dearnaley, Morwenna Boddington, Aftab Ahmad, Márk Z. Németh, Alexandra Pintye, Markus Gorfer, Hyeon-Dong Shin, Gábor M. Kovács, Niloofar Vaghefi, Levente Kiss

published 04 Dec 2025

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High-Resolution Melting assays development for discrimination of fungal pathogens causing Grapevine Trunk Diseases

Filipe Azevedo-Nogueira, Ana Gaspar, Sara Barrias, Bruna Costa, Beatriz Silva, Cecília Rego, Paula Martins-Lopes

published 01 Dec 2025

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Genome sequencing and analysis of isolates of Cytospora sorbicola and Cytospora plurivora associated with almond and peach canker

Tawanda E. Maguvu, Rosa J. Frias, Florent P. Trouillas

published 17 Oct 2025

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Genomic characterization and fermentation study of the endophyte Stemphylium sp. (Aa22), a producer of bioactive alkyl-resorcinols

Jorge Rojas López-Menchero, Juan Imperial, Maria Fe Andrés, Carmen Elisa Díaz, Azucena González-Coloma

published 17 Sep 2025

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A novel mitovirus associated with the fungal entomopathogen Zoophthora radicans

Meaghan J. Adler, McKayla M. Martin, Paula Rozo-Lopez, Benjamin J. Parker

published 05 Sep 2025

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Virus and viroid diversity in hops, investigating the German hop virome

Ali Pasha, Gritta Schrader, Heiko Ziebell

published 07 Aug 2025

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Discovery of novel targets for important human and plant fungal pathogens via an automated computational pipeline HitList

David E. Condon, Brenda K. Schroeder, Paul A. Rowley, F. Marty Ytreberg

published 03 Jun 2025

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Production of the light-activated elsinochrome phytotoxin in the soybean pathogen Coniothyrium glycines hints at virulence factor

Nicholas Greatens, Harun M. Murithi, Danny Coyne, Steven J. Clough, Michael Sulyok, Wahab Oluwanisola Okunowo, Hamed K. Abbas, W. Thomas Shier, Rachel A. Koch Bach

published 13 May 2025

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Variation in SSRs at different genomic regions and implications for the evolution and identification of Armillaria gallica

Shengnan Li, Jiao Xu, Yipu Hu, Xiaohong Ou, Qingsong Yuan, Pengfei Li, Weike Jiang, Lanping Guo, Tao Zhou

published 15 Oct 2024

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Metagenomic analysis of sewage for surveillance of bacterial pathogens: A release experiment to determine sensitivity

Simon Kohle, Thomas N. Petersen, Håkan Vigre, Markus Hans Kristofer Johansson, Frank M. Aarestrup

published 16 May 2024

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Development of a PCR-based assay for specific and sensitive detection of Fusarium buharicum from infected okra plant

Swapan Kumar Paul, Dipali Rani Gupta, Masatoshi Ino, Makoto Ueno

published 16 Apr 2024

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Exophiala chapopotensis sp. nov., an extremotolerant black yeast from an oil-polluted soil in Mexico; phylophenetic approach to species hypothesis in the Herpotrichiellaceae family

Martín R. Ide-Pérez, Ayixon Sánchez-Reyes, Jorge Luis Folch-Mallol, María del Rayo Sánchez-Carbente

published 14 Feb 2024

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