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Functional genomics

Genome-wide maps of distal gene regulatory enhancers active in the human placenta

Joanna Zhang, Corinne N. Simonti, John A. Capra

Genomic region detection via Spatial Convex Clustering

John Nagorski, Genevera I. Allen

Genomic analysis of an Argentinean isolate of Spodoptera frugiperda granulovirus reveals that various baculoviruses code for Lef-7 proteins with three F-box domains

María Leticia Ferrelli, Matías Luis Pidre, [ ... ], Víctor Romanowski

Identification and annotation of breed-specific single nucleotide polymorphisms in Bos taurus genomes

Bartosz Czech, Magdalena Frąszczak, Magda Mielczarek, Joanna Szyda

A catalog of potential putative functional variants in psoriasis genome-wide association regions

Yan Lin, Lu Liu, [ ... ], Xuejun Zhang

iCopyDAV: Integrated platform for copy number variations—Detection, annotation and visualization

Prashanthi Dharanipragada, Sriharsha Vogeti, Nita Parekh

Sequence-based multiscale modeling for high-throughput chromosome conformation capture (Hi-C) data analysis

Kelin Xia

Genome analysis of a novel Group I alphabaculovirus obtained from Oxyplax ochracea

Jun Wang, Dianhai Hou, [ ... ], Manli Wang

Identification and validation of reference genes for gene expression analysis in Aphidius gifuensis (Hymenoptera: Aphidiidae)

Xue-Ke Gao, Shuai Zhang, [ ... ], Jin-Jie Cui

Enrichment of colorectal cancer associations in functional regions: Insight for using epigenomics data in the analysis of whole genome sequence-imputed GWAS data

Stephanie A. Bien, Paul L. Auer, [ ... ], on behalf of GECCO and CCFR

Genome-scale identification of nucleosome organization by using 1000 porcine oocytes at different developmental stages

Chenyu Tao, Juan Li, [ ... ], Honglin Liu

Analysis of the complete genome sequence of Nocardia seriolae UTF1, the causative agent of fish nocardiosis: The first reference genome sequence of the fish pathogenic Nocardia species

Motoshige Yasuike, Issei Nishiki, [ ... ], Masaya Katoh

Functionally-focused algorithmic analysis of high resolution microarray-CGH genomic landscapes demonstrates comparable genomic copy number aberrations in MSI and MSS sporadic colorectal cancer

Hamad Ali, Milad S. Bitar, [ ... ], Fahd Al-Mulla

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