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DNA replication

MT1-MMP-dependent ECM processing regulates laminB1 stability and mediates replication fork restart

Varsha Thakur, Juliano Tiburcio de Freitas, Yuan Li, Keman Zhang, Alyssa Savadelis, Barbara Bedogni

published 08 Jul 2021

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Genome-wide binding analysis of 195 DNA binding proteins reveals “reservoir” promoters and human specific SVA-repeat family regulation

Michael J. Smallegan, Soraya Shehata, Savannah F. Spradlin, Alison Swearingen, Graycen Wheeler, Arpan Das, Giulia Corbet, Benjamin Nebenfuehr, Daniel Ahrens, Devin Tauber, Shelby Lennon, Kevin Choi, Thao Huynh, Tom Wieser, Kristen Schneider, Michael Bradshaw, Joel Basken, Maria Lai, Timothy Read, Matt Hynes-Grace, Dan Timmons, Jon Demasi, John L. Rinn

published 24 Jun 2021

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RNA-guided gene editing of the murine gammaherpesvirus 68 genome reduces infectious virus production

Hui-Chen Chang Foreman, Varvara Kirillov, Gabrielle Paniccia, Demetra Catalano, Trevor Andrunik, Swati Gupta, Laurie T. Krug, Yue Zhang

published 04 Jun 2021

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Division of labor of Y-family polymerases in translesion-DNA synthesis for distinct types of DNA damage

Yuriko Inomata, Takuya Abe, Masataka Tsuda, Shunichi Takeda, Kouji Hirota

published 01 Jun 2021

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Dynamics of SAS-I mediated H4 K16 acetylation during DNA replication in yeast

Mark Boltengagen, Anke Samel-Pommerencke, David Fechtig, Ann E. Ehrenhofer-Murray

published 20 May 2021

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Overexpression of oncogenic H-Ras in hTERT-immortalized and SV40-transformed human cells targets replicative and specialized DNA polymerases for depletion

Wei-chung Tsao, Raquel Buj, Katherine M. Aird, Julia M. Sidorova, Kristin A. Eckert

published 07 May 2021

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Investigating variability in microbial community composition in replicate environmental DNA samples down lake sediment cores

John K. Pearman, Georgia Thomson-Laing, Jamie D. Howarth, Marcus J. Vandergoes, Lucy Thompson, Andrew Rees, Susanna A. Wood

published 03 May 2021

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Protection of the C. elegans germ cell genome depends on diverse DNA repair pathways during normal proliferation

Bettina Meier, Nadezda V. Volkova, Ye Hong, Simone Bertolini, Víctor González-Huici, Tsvetana Petrova, Simon Boulton, Peter J. Campbell, Moritz Gerstung, Anton Gartner

published 27 Apr 2021

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Deep sequencing of DNA from urine of kidney allograft recipients to estimate donor/recipient-specific DNA fractions

Aziz Belkadi, Gaurav Thareja, Darshana Dadhania, John R. Lee, Thangamani Muthukumar, Catherine Snopkowski, Carol Li, Anna Halama, Sara Abdelkader, Silvana Abdulla, Yasmin Mahmoud, Joel Malek, Manikkam Suthanthiran, Karsten Suhre

published 15 Apr 2021

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Multiplex detection of “Candidatus Liberibacter asiaticus” and Spiroplasma citri by qPCR and droplet digital PCR

Yogita Maheshwari, Vijayanandraj Selvaraj, Kristine Godfrey, Subhas Hajeri, Raymond Yokomi

published 17 Mar 2021

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Ultrasensitive hybridization capture: Reliable detection of <1 copy/mL short cell-free DNA from large-volume urine samples

Amy Oreskovic, Barry R. Lutz

published 26 Feb 2021

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Transcriptomic profiling and genomic mutational analysis of Human coronavirus (HCoV)-229E -infected human cells

Nehemya Friedman, Jasmine Jacob-Hirsch, Yaron Drori, Eyal Eran, Nitzan Kol, Omri Nayshool, Ella Mendelson, Gideon Rechavi, Michal Mandelboim

published 25 Feb 2021

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Shared and distinct roles of Esc2 and Mms21 in suppressing genome rearrangements and regulating intracellular sumoylation

Raymond T. Suhandynata, Yong-Qi Gao, Ann L. Zhou, Yusheng Yang, Pang-Che Wang, Huilin Zhou

published 18 Feb 2021

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