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DNA modification

Genome-wide DNA methylation analysis of hippocampal tissue in a murine model of attention deficit-hyperactivity disorder

Rodrigo Vidal, Ignacio Lopez, Gonzalo Ugarte, Darwin Contreras, Ricardo Piña, Felipe Godoy, Carlos Rozas, David Rubio, Carola Mantellero, Luis Constandil, Jorge Escobar, Bernardo Morales

published 04 Jun 2025

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AD-GCN: A novel graph convolutional network integrating multi-omics data for enhanced Alzheimer’s disease diagnosis

Zilu Li, Qingyun Li, Xiaoqing Li, Wei Luo, Haiyan Guo, Chunyan Zhao, Canzhen Yang, Anke Xie, Kai Hu, Yangfan Guo

published 02 Jun 2025

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Integrative analysis of epigenetic subtypes in acute myeloid Leukemia: A multi-center study combining machine learning for prognostic and therapeutic insights

Jincan Li, Shengyue Wang

published 28 May 2025

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Epigenetic regulation of individual components of combined hepatocellular-cholangiocarcinoma

Kyle M. Schachtschneider, Luke N. Redlon, Ryan Peter Lokken, Yu-Hui Huang, Grace Guzman, Lawrence B. Schook, Ron C. Gaba

published 27 May 2025

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Identification of maternal allele sequences of IG-DMR that are essential for neonatal viability

Satoshi Hara, Akari Muramatsu, Miho Terao, Shuji Takada

published 22 May 2025

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Epigenetic assessments of alcohol consumption predict mortality in smokers at risk for lung cancer in the prostate, lung, colorectal and ovarian cancer screening trial

Robert Philibert, Steven R.H. Beach, James A. Mills, Kelsey Dawes, Richard M. Hoffman, Jessica C. Sieren, Ellyse M. Froehlich, Kaitlyn M. deBlois, Jeffrey D. Long

published 22 May 2025

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Bisulphite sequencing in the presence of cytosine-conversion errors

Thomas James Ellis, Viktoria Nizhynska, Rahul Pisupati, Almudena Mollá-Morales, Magnus Nordborg

published 21 May 2025

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The application of cell-free DNA methylation patterns in critical illnesses: A protocol paper

Shih-Han Kao, K. Greer Stumpf, Hunter A. Gaudio, John C. Greenwood, Samuel S. Shin, Frances S. Shofer, David H. Jang

published 12 May 2025

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Epigenetic background of lineage-specific gene expression landscapes of four Staphylococcus aureus hospital isolates

Ilya S. Korotetskiy, Sergey V. Shilov, Tatyana V. Kuznetsova, Natalya Zubenko, Lyudmila Ivanova, Oleg N. Reva

published 05 May 2025

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DNMT3A facilitates breast cancer progression via regulating ADAMTS8 mediated EGFR-MEK-ERK activation

Shan Yang, Meng Cheng, Shaonan Zhang, Haoqi Wang, Jiaxing Wang, Xi Zhang, Yunzhe Mi, Sainan Li

published 05 May 2025

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Identification and functional analysis of five hub lncRNAs associated with oncogenesis of Hepatocellular Carcinoma

Zhaomin Deng, Lu Pu, Yongxin Ma, Hao Jiang

published 30 Apr 2025

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Gene expression profiling, prognosis, and immune microenvironment of KLF4 in malignancies

Shoukai Yu, Lingmei Qian, Tianlang Tong, Xujun Ma

published 29 Apr 2025

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Noninvasive prognostication of hepatocellular carcinoma based on cell-free DNA methylation

Ran Hu, Benjamin Tran, Shuo Li, Mary L. Stackpole, Weihua Zeng, Yonggang Zhou, Andrew Melehy, Saeed Sadeghi, Richard S. Finn, Xianghong Jasmine Zhou, Wenyuan Li, Vatche G. Agopian

published 25 Apr 2025

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