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DNA modification

Integrated DNA methylome and transcriptome analysis reveals the epigenetic regulatory mechanisms underlying maize response to copper stress

Lin Zhao, Mengyan Zhang, Qi Wu, Xi Wu, Zhenyu Yun

published 28 Aug 2025

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DNA methylation orchestrates secondary metabolite biosynthesis and transport in Papaver somniferum

Tuba Aksoylu, Mine Turktas

published 25 Aug 2025

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Common molecular links and therapeutic insights between type 2 diabetes and kidney cancer

Reaz Ahmmed, Mohammad Amirul Islam, Md. Taohid Hasan, Arnob Sarker, Md. Ahad Ali, Md. Saiful Islam, Mst. Zafrin Sultana, Md. Nurul Haque Mollah

published 20 Aug 2025

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DNA methylation differences stratified by normalized fetal/placental weight ratios suggest neurodevelopmental deficits in neonates with congenital heart disease

Marin Jacobwitz, Michael Xie, Jamie Catalano, Ingo Helbig, J. William Gaynor, Nancy Burnham, Rebecca L. Linn, Juliana Gebb, Mark W. Russell, Hakon Hakonarson, Barbara H. Chaiyachati, Ana G. Cristancho

published 06 Aug 2025

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A comparison of DNA methylation detection between HiFi sequencing and whole genome bisulfite sequencing in monozygotic twins with Down syndrome

Kanyanee Promsawan, Chalurmpon Srichomthong, Monnat Pongpanich, Vorasuk Shotelersuk

published 05 Aug 2025

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Stable preservation and recovery of methylation marks from FTA elute cards in species with nucleated red blood cells using a customized DNA extraction method

Livia Gerber, Sarah L. Whiteley, Erin E. Hahn, Clare E. Holleley

published 31 Jul 2025

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Epigenome and three-dimensional genome architecture remodeling during NDM29-mediated retro-transformation of neuroblastoma cells

Francesca Baldini, Aldo Pagano, Lama Zeaiter, Paolo Bianchini, Hawraa Zbeeb, Alberto Diaspro, Laura Vergani

published 31 Jul 2025

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Loss-of-function mutation of NSD2 is associated with abnormal placentation accompanied by fetal growth retardation in mice

Eriko Ohnishi, Shiori Kinoshita, Kazuhiko Nakabayashi, Kenichiro Hata, Tomoko Kawai

published 21 Jul 2025

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Prenatal stress increases corticosterone levels in offspring by impairing placental glucocorticoid barrier function

Can Liu, Hongya Liu, Hongyu Li, Deguang Yang, Ye Li, Rui Wang, Jiashu Zhu, Shuqin Ma, Suzhen Guan

published 18 Jul 2025

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Whole genome DNA methylation patterns in tissue and cfDNA associated with fibrosis reflect the complex signature of MASLD

Jongseong Ahn, Soyeon Kim, Jae Yoon Jeong, Sunghoon Heo, Kyung-hee Pyo, Eun-Ae Shin, Wonsik Kim, Jae-Ho Lee, Na Ryung Choi, Han Ah Lee, Hwang-Phill Kim, Sang-Hyun Song, Hwi Young Kim, Tae-You Kim, Jung Weon Lee

published 17 Jul 2025

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Measuring technical variability in illumina DNA methylation microarrays

Anderson A. Butler, Jason J. Kras, Karolina P. Chwalek, Enrique I. Ramos, Isaac J. Bishof, David S. Vogel, Daniel L. Vera

published 11 Jul 2025

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Rationale and study protocol of the MAMELI Cohort study (Mapping the Methylation of repetitive elements to track the Exposome effects on health: the city of Legnano as a Living lab)

Valentina Bollati, Federica Rota, Laura Dioni, Chiara Favero, Simona Iodice, Marta Gallazzi, Andrea Spinazzè, Giacomo Fanti, Davide Campagnolo, Tiago Nardi, Davide Biganzoli, Eva Dariol, Rachele Matsagani, Mirjam Hoxha, Paola Monti, Benedetta Albetti, Letizia Tarantini, Davide Barbuto, Ester Luconi, Giuseppe Marano, Giacomo Biganzoli, Roberta Biciuffi, Patrizia Boracchi, Domenico M. Cavallo, Pilar M. Guerrieri, Fabio Mosca, Stefano Gustincich, Giovanni Sanesi, Luca Ferrari, Michele Carugno, Silvia Fustinoni, Angela Cecilia Pesatori, Luca Pandolfini, Michele Miragoli, Andrea Cattaneo, Elia Biganzoli

published 09 Jul 2025

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3Mont: A multi-omics integrative tool for breast cancer subtype stratification

Miray Unlu Yazici, J. S. Marron, Burcu Bakir-Gungor, Fei Zou, Malik Yousef

published 27 Jun 2025

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