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DNA modification

Pipeline for Large-Scale Microdroplet Bisulfite PCR-Based Sequencing Allows the Tracking of Hepitype Evolution in Tumors

Alexander Herrmann, Andrea Haake, Ole Ammerpohl, Idoia Martin-Guerrero, Karol Szafranski, Kathryn Stemshorn, Michael Nothnagel, Steve K. Kotsopoulos, Julia Richter, Jason Warner, Jeff Olson, Darren R. Link, Stefan Schreiber, Michael Krawczak, Matthias Platzer, Peter Nürnberg, Reiner Siebert, Jochen Hampe

published 05 Jul 2011

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High DNA Methylation Pattern Intratumoral Diversity Implies Weak Selection in Many Human Colorectal Cancers

Kimberly D. Siegmund, Paul Marjoram, Simon Tavaré, Darryl Shibata

published 28 Jun 2011

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Particle Swarm Optimization with Reinforcement Learning for the Prediction of CpG Islands in the Human Genome

Li-Yeh Chuang, Hsiu-Chen Huang, Ming-Cheng Lin, Cheng-Hong Yang

published 28 Jun 2011

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Epigenetic Activation of SOX11 in Lymphoid Neoplasms by Histone Modifications

Maria Carmela Vegliante, Cristina Royo, Jara Palomero, Itziar Salaverria, Balazs Balint, Idoia Martín-Guerrero, Xabier Agirre, Amaia Lujambio, Julia Richter, Silvia Xargay-Torrent, Silvia Bea, Luis Hernandez, Anna Enjuanes, María José Calasanz, Andreas Rosenwald, German Ott, José Roman-Gomez, Felipe Prosper, Manel Esteller, Pedro Jares, Reiner Siebert, Elias Campo, José I. Martín-Subero, Virginia Amador

published 27 Jun 2011

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B Vitamins, Methionine and Alcohol Intake and Risk of Colon Cancer in Relation to BRAF Mutation and CpG Island Methylator Phenotype (CIMP)

Eva S. Schernhammer, Edward Giovannucci, Yoshifumi Baba, Charles S. Fuchs, Shuji Ogino

published 27 Jun 2011

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DNA Methylation Changes in Atypical Adenomatous Hyperplasia, Adenocarcinoma In Situ, and Lung Adenocarcinoma

Suhaida A. Selamat, Janice S. Galler, Amit D. Joshi, M. Nicky Fyfe, Mihaela Campan, Kimberly D. Siegmund, Keith M. Kerr, Ite A. Laird-Offringa

published 23 Jun 2011

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Co-Localization of the Oncogenic Transcription Factor MYCN and the DNA Methyl Binding Protein MeCP2 at Genomic Sites in Neuroblastoma

Derek M. Murphy, Patrick G. Buckley, Sudipto Das, Karen M. Watters, Kenneth Bryan, Raymond L. Stallings

published 22 Jun 2011

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Recognition of 5-Hydroxymethylcytosine by the Uhrf1 SRA Domain

Carina Frauer, Thomas Hoffmann, Sebastian Bultmann, Valentina Casa, M. Cristina Cardoso, Iris Antes, Heinrich Leonhardt

published 22 Jun 2011

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Transformation of Human Mesenchymal Cells and Skin Fibroblasts into Hematopoietic Cells

David M. Harris, Inbal Hazan-Haley, Kevin Coombes, Carlos Bueso-Ramos, Jie Liu, Zhiming Liu, Ping Li, Murali Ravoori, Lynne Abruzzo, Lin Han, Sheela Singh, Michael Sun, Vikas Kundra, Razelle Kurzrock, Zeev Estrov

published 22 Jun 2011

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Epigenetic Predictor of Age

Sven Bocklandt, Wen Lin, Mary E. Sehl, Francisco J. Sánchez, Janet S. Sinsheimer, Steve Horvath, Eric Vilain

published 22 Jun 2011

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Structural and Histone Binding Ability Characterizations of Human PWWP Domains

Hong Wu, Hong Zeng, Robert Lam, Wolfram Tempel, Maria F. Amaya, Chao Xu, Ludmila Dombrovski, Wei Qiu, Yanming Wang, Jinrong Min

published 20 Jun 2011

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Fractal Characteristics of May-Grünwald-Giemsa Stained Chromatin Are Independent Prognostic Factors for Survival in Multiple Myeloma

Daniela P. Ferro, Monica A. Falconi, Randall L. Adam, Manoela M. Ortega, Carmen P. Lima, Carmino A. de Souza, Irene Lorand-Metze, Konradin Metze

published 16 Jun 2011

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Identification and Functional Analysis of Epigenetically Silenced MicroRNAs in Colorectal Cancer Cells

Hongli Yan, Ae-jin Choi, Byron H. Lee, Angela H. Ting

published 16 Jun 2011

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