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Database and informatics methods

AllerHunter: A SVM-Pairwise System for Assessment of Allergenicity and Allergic Cross-Reactivity in Proteins

Hon Cheng Muh, Joo Chuan Tong, Martti T. Tammi

Tracing the Evolution of Competence in Haemophilus influenzae

Heather Maughan, Rosemary J. Redfield

WNT/β-Catenin Signalling and Epithelial Patterning in the Homoscleromorph Sponge Oscarella

Pascal Lapébie, Eve Gazave, [ ... ], Carole Borchiellini

Fido, a Novel AMPylation Domain Common to Fic, Doc, and AvrB

Lisa N. Kinch, Melanie L. Yarbrough, Kim Orth, Nick V. Grishin

Evolution of Alternative Splicing Regulation: Changes in Predicted Exonic Splicing Regulators Are Not Associated with Changes in Alternative Splicing Levels in Primates

Manuel Irimia, Jakob Lewin Rukov, Scott William Roy

Mortality of Patients Lost to Follow-Up in Antiretroviral Treatment Programmes in Resource-Limited Settings: Systematic Review and Meta-Analysis

Martin W. G. Brinkhof, Mar Pujades-Rodriguez, Matthias Egger

Evidence of Molecular Evolution Driven by Recombination Events Influencing Tropism in a Novel Human Adenovirus that Causes Epidemic Keratoconjunctivitis

Michael P. Walsh, Ashish Chintakuntlawar, [ ... ], Morris S. Jones

Gene Classification Based on Amino Acid Motifs and Residues: The DLX (distal-less) Test Case

Nuno A. Fonseca, Cristina P. Vieira, Jorge Vieira

Transcriptome-Wide Prediction of miRNA Targets in Human and Mouse Using FASTH

Chikako Ragan, Nicole Cloonan, [ ... ], Mark A. Ragan

HIV-1 Superinfection in the Antiretroviral Therapy Era: Are Seroconcordant Sexual Partners at Risk?

Mary S. Campbell, Geoffrey S. Gottlieb, [ ... ], James I. Mullins

Codon Size Reduction as the Origin of the Triplet Genetic Code

Pavel V. Baranov, Maxime Venin, Gregory Provan

A Sequence and Structure Based Method to Predict Putative Substrates, Functions and Regulatory Networks of Endo Proteases

Prasanna Venkatraman, Satish Balakrishnan, [ ... ], Suyog Pol

Regulatory Elements within the Prodomain of Falcipain-2, a Cysteine Protease of the Malaria Parasite Plasmodium falciparum

Kailash C. Pandey, David T. Barkan, Andrej Sali, Philip J. Rosenthal

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