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Database and informatics methods

A Regulatory Role for NBS1 in Strand-Specific Mutagenesis during Somatic Hypermutation

Likun Du, Deborah K. Dunn-Walters, Krystyna H. Chrzanowska, Tanja Stankovic, Ashwin Kotnis, Xin Li, Jiayi Lu, Gösta Eggertsen, Claire Brittain, Sergey W. Popov, Andrew R. Gennery, A. Malcolm R. Taylor, Qiang Pan-Hammarström

published 25 Jun 2008

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Consequences of Cold-Ischemia Time on Primary Nonfunction and Patient and Graft Survival in Liver Transplantation: A Meta-Analysis

James E. Stahl, Jennifer E. Kreke, Fawaz Ali Abdul Malek, Andrew J. Schaefer, Joseph Vacanti

published 25 Jun 2008

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Identifying Canadian Freshwater Fishes through DNA Barcodes

Nicolas Hubert, Robert Hanner, Erling Holm, Nicholas E. Mandrak, Eric Taylor, Mary Burridge, Douglas Watkinson, Pierre Dumont, Allen Curry, Paul Bentzen, Junbin Zhang, Julien April, Louis Bernatchez

published 18 Jun 2008

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Estimation of Isolation Times of the Island Species in the Drosophila simulans Complex from Multilocus DNA Sequence Data

Shannon R. McDermott, Richard M. Kliman

published 18 Jun 2008

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Proteomic Analysis of Ovarian Cancer Cells Reveals Dynamic Processes of Protein Secretion and Shedding of Extra-Cellular Domains

Vitor M. Faça, Aviva P. Ventura, Mathew P. Fitzgibbon, Sandra R. Pereira-Faça, Sharon J. Pitteri, Ann E. Green, Renee C. Ireton, Qing Zhang, Hong Wang, Kathy C. O'Briant, Charles W. Drescher, Michèl Schummer, Martin W. McIntosh, Beatrice S. Knudsen, Samir M. Hanash

published 18 Jun 2008

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A Plasmodium falciparum Host-Targeting Motif Functions in Export during Blood Stage Infection of the Rodent Malarial Parasite Plasmodium berghei

Julia J. MacKenzie, Noé D. Gómez, Souvik Bhattacharjee, Shaina Mann, Kasturi Haldar

published 11 Jun 2008

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Meta-Analysis of the Effects of Predation on Animal Prey Abundance: Evidence from UK Vertebrates

Alison R. Holt, Zoe G. Davies, Claire Tyler, Samantha Staddon

published 11 Jun 2008

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MemBrain: Improving the Accuracy of Predicting Transmembrane Helices

Hongbin Shen, James J. Chou

published 11 Jun 2008

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Pattern of the Divergence of Olfactory Receptor Genes during Tetrapod Evolution

Takushi Kishida

published 11 Jun 2008

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Functional Diversification of Paralogous Transcription Factors via Divergence in DNA Binding Site Motif and in Expression

Larry N. Singh, Sridhar Hannenhalli

published 04 Jun 2008

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SP⁵: Improving Protein Fold Recognition by Using Torsion Angle Profiles and Profile-Based Gap Penalty Model

Wei Zhang, Song Liu, Yaoqi Zhou

published 04 Jun 2008

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Analysis of the EIAV Rev-Responsive Element (RRE) Reveals a Conserved RNA Motif Required for High Affinity Rev Binding in Both HIV-1 and EIAV

Jae-Hyung Lee, Gloria Culver, Susan Carpenter, Drena Dobbs

published 04 Jun 2008

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iTools: A Framework for Classification, Categorization and Integration of Computational Biology Resources

Ivo D. Dinov, Daniel Rubin, William Lorensen, Jonathan Dugan, Jeff Ma, Shawn Murphy, Beth Kirschner, William Bug, Michael Sherman, Aris Floratos, David Kennedy, H. V. Jagadish, Jeanette Schmidt, Brian Athey, Andrea Califano, Mark Musen, Russ Altman, Ron Kikinis, Isaac Kohane, Scott Delp, D. Stott Parker, Arthur W. Toga

published 28 May 2008

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