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Database and informatics methods

Genetic Epidemiology of Glioblastoma Multiforme: Confirmatory and New Findings from Analyses of Human Leukocyte Antigen Alleles and Motifs

Wei Song, Avima M. Ruder, Liangyuan Hu, Yufeng Li, Rong Ni, Wenshuo Shao, Richard A. Kaslow, MaryAnn Butler, Jianming Tang

published 23 Sep 2009

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Solution Structure and Phylogenetics of Prod1, a Member of the Three-Finger Protein Superfamily Implicated in Salamander Limb Regeneration

Acely Garza-Garcia, Richard Harris, Diego Esposito, Phillip B. Gates, Paul C. Driscoll

published 22 Sep 2009

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Proteomic Interrogation of Androgen Action in Prostate Cancer Cells Reveals Roles of Aminoacyl tRNA Synthetases

Adaikkalam Vellaichamy, Arun Sreekumar, John R. Strahler, Theckelnaycke Rajendiran, Jindan Yu, Sooryanarayana Varambally, Yong Li, Gilbert S. Omenn, Arul M. Chinnaiyan, Alexey I. Nesvizhskii

published 18 Sep 2009

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Prodepth: Predict Residue Depth by Support Vector Regression Approach from Protein Sequences Only

Jiangning Song, Hao Tan, Khalid Mahmood, Ruby H. P. Law, Ashley M. Buckle, Geoffrey I. Webb, Tatsuya Akutsu, James C. Whisstock

published 17 Sep 2009

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Complete Genome Sequence of Francisella tularensis Subspecies holarctica FTNF002-00

Ravi D. Barabote, Gary Xie, Thomas S. Brettin, Steven H. Hinrichs, Paul D. Fey, Justin J. Jay, Jennifer L. Engle, Shubhada D. Godbole, Jyothi M. Noronha, Richard H. Scheuermann, Liwei W. Zhou, Christine Lion, Michael P. Dempsey

published 16 Sep 2009

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Comparative Sequence and Structural Analyses of G-Protein-Coupled Receptor Crystal Structures and Implications for Molecular Models

Catherine L. Worth, Gunnar Kleinau, Gerd Krause

published 16 Sep 2009

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Solution Behavior and Activity of a Halophilic Esterase under High Salt Concentration

Lang Rao, Xiubo Zhao, Fang Pan, Yin Li, Yanfen Xue, Yanhe Ma, Jian R. Lu

published 14 Sep 2009

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The Complex Spatio-Temporal Regulation of the Drosophila Myoblast Attractant Gene duf/kirre

K. G. Guruharsha, Mar Ruiz-Gomez, H. A. Ranganath, Rahul Siddharthan, K. VijayRaghavan

published 09 Sep 2009

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Treatment Outcomes of Multidrug-Resistant Tuberculosis: A Systematic Review and Meta-Analysis

James C. Johnston, Neal C. Shahidi, Mohsen Sadatsafavi, J. Mark Fitzgerald

published 09 Sep 2009

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Prediction and Experimental Validation of Novel STAT3 Target Genes in Human Cancer Cells

Young Min Oh, Jong Kyoung Kim, Yongwook Choi, Seungjin Choi, Joo-Yeon Yoo

published 04 Sep 2009

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Identifying Cis-Regulatory Sequences by Word Profile Similarity

Garmay Leung, Michael B. Eisen

published 04 Sep 2009

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The FunGenES Database: A Genomics Resource for Mouse Embryonic Stem Cell Differentiation

Herbert Schulz, Raivo Kolde, Priit Adler, Irène Aksoy, Konstantinos Anastassiadis, Michael Bader, Nathalie Billon, Hélène Boeuf, Pierre-Yves Bourillot, Frank Buchholz, Christian Dani, Michael Xavier Doss, Lesley Forrester, Murielle Gitton, Domingos Henrique, Jürgen Hescheler, Heinz Himmelbauer, Norbert Hübner, Efthimia Karantzali, Androniki Kretsovali, Sandra Lubitz, Laurent Pradier, Meena Rai, Jüri Reimand, Alexandra Rolletschek, Agapios Sachinidis, Pierre Savatier, Francis Stewart, Mike P. Storm, Marina Trouillas, Jaak Vilo, Melanie J. Welham, Johannes Winkler, Anna M. Wobus, Antonis K. Hatzopoulos, for the “Functional genomics in embryonic stem cells” Consortium

published 03 Sep 2009

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The dif/Xer Recombination Systems in Proteobacteria

Christophe Carnoy, Claude-Alain Roten

published 03 Sep 2009

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