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Database and informatics methods

Three-Dimensional Structure of N-Terminal Domain of DnaB Helicase and Helicase-Primase Interactions in Helicobacter pylori

Tara Kashav, Ramgopal Nitharwal, S. Arif Abdulrehman, Azat Gabdoulkhakov, Wolfram Saenger, Suman Kumar Dhar, Samudrala Gourinath

published 20 Oct 2009

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Crystal Structure of the ATPase Domain of the Human AAA+ Protein Paraplegin/SPG7

Tobias Karlberg, Susanne van den Berg, Martin Hammarström, Johanna Sagemark, Ida Johansson, Lovisa Holmberg-Schiavone, Herwig Schüler

published 20 Oct 2009

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Assessment of Metabolome Annotation Quality: A Method for Evaluating the False Discovery Rate of Elemental Composition Searches

Fumio Matsuda, Yoko Shinbo, Akira Oikawa, Masami Yokota Hirai, Oliver Fiehn, Shigehiko Kanaya, Kazuki Saito

published 16 Oct 2009

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Sequence and Structure Signatures of Cancer Mutation Hotspots in Protein Kinases

Anshuman Dixit, Lin Yi, Ragul Gowthaman, Ali Torkamani, Nicholas J. Schork, Gennady M. Verkhivker

published 16 Oct 2009

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Direct Repeat 6 from Human Herpesvirus-6B Encodes a Nuclear Protein that Forms a Complex with the Viral DNA Processivity Factor p41

Mariane H. Schleimann, Janni M. L. Møller, Emil Kofod-Olsen, Per Höllsberg

published 15 Oct 2009

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Oncogene Mutations, Copy Number Gains and Mutant Allele Specific Imbalance (MASI) Frequently Occur Together in Tumor Cells

Junichi Soh, Naoki Okumura, William W. Lockwood, Hiromasa Yamamoto, Hisayuki Shigematsu, Wei Zhang, Raj Chari, David S. Shames, Ximing Tang, Calum MacAulay, Marileila Varella-Garcia, Tõnu Vooder, Ignacio I. Wistuba, Stephen Lam, Rolf Brekken, Shinichi Toyooka, John D. Minna, Wan L. Lam, Adi F. Gazdar

published 14 Oct 2009

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Extracellular and Intracellular Polyphenol Oxidases Cause Opposite Effects on Sensitivity of Streptomyces to Phenolics: A Case of Double-Edged Sword

Han-Yu Yang, Carton W. Chen

published 14 Oct 2009

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Cost-Effectiveness of an Intervention to Reduce Emergency Re-Admissions to Hospital among Older Patients

Nicholas Graves, Mary Courtney, Helen Edwards, Anne Chang, Anthony Parker, Kathleen Finlayson

published 14 Oct 2009

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Empirical Bayes Analysis of Quantitative Proteomics Experiments

Adam A. Margolin, Shao-En Ong, Monica Schenone, Robert Gould, Stuart L. Schreiber, Steven A. Carr, Todd R. Golub

published 14 Oct 2009

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Structural and Functional Similarity between the Bacterial Type III Secretion System Needle Protein PrgI and the Eukaryotic Apoptosis Bcl-2 Proteins

Matthew D. Shortridge, Robert Powers

published 13 Oct 2009

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New Genotype of Dengue Type 3 Virus Circulating in Brazil and Colombia Showed a Close Relationship to Old Asian Viruses

Victor Hugo Aquino, Alberto Anastacio Amarilla, Helda Liz Alfonso, Weber Cheli Batista, Luiz Tadeu Moraes Figueiredo

published 13 Oct 2009

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Searching for New Clues about the Molecular Cause of Endomyocardial Fibrosis by Way of In Silico Proteomics and Analytical Chemistry

Misaki Wayengera

published 12 Oct 2009

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Conservative Fragments in Bacterial 16S rRNA Genes and Primer Design for 16S Ribosomal DNA Amplicons in Metagenomic Studies

Yong Wang, Pei-Yuan Qian

published 09 Oct 2009

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