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Database and informatics methods

Phylogenetic Analysis of the MS4A and TMEM176 Gene Families

Jonathan Zuccolo, Jeremy Bau, [ ... ], Julie P. Deans

Comprehensive Survey of SNPs in the Affymetrix Exon Array Using the 1000 Genomes Dataset

Eric R. Gamazon, Wei Zhang, M. Eileen Dolan, Nancy J. Cox

Whole Methylome Analysis by Ultra-Deep Sequencing Using Two-Base Encoding

Christina A. Bormann Chung, Victoria L. Boyd, [ ... ], Melissa Barker

The Porcelain Crab Transcriptome and PCAD, the Porcelain Crab Microarray and Sequence Database

Abderrahmane Tagmount, Mei Wang, [ ... ], Jonathon H. Stillman

Tumor Transcriptome Sequencing Reveals Allelic Expression Imbalances Associated with Copy Number Alterations

Brian B. Tuch, Rebecca R. Laborde, [ ... ], David I. Smith

Application Description and Policy Model in Collaborative Environment for Sharing of Information on Epidemiological and Clinical Research Data Sets

Elias César Araujo de Carvalho, Adelia Portero Batilana, [ ... ], Ricardo Pietrobon

Complete Genome Sequence of Avian Paramyxovirus (APMV) Serotype 5 Completes the Analysis of Nine APMV Serotypes and Reveals the Longest APMV Genome

Arthur S. Samuel, Anandan Paldurai, [ ... ], Siba K. Samal

Large-Scale Sequence Analysis of Hemagglutinin of Influenza A Virus Identifies Conserved Regions Suitable for Targeting an Anti-Viral Response

Leepakshi Sahini, Anna Tempczyk-Russell, Ritu Agarwal

Structural and Functional Restraints on the Occurrence of Single Amino Acid Variations in Human Proteins

Sungsam Gong, Tom L. Blundell

The DIANA-mirExTra Web Server: From Gene Expression Data to MicroRNA Function

Panagiotis Alexiou, Manolis Maragkakis, [ ... ], Artemis G. Hatzigeorgiou

Monitoring Genomic Sequences during SELEX Using High-Throughput Sequencing: Neutral SELEX

Bob Zimmermann, Tanja Gesell, [ ... ], Renée Schroeder

A Second Actin-Like MamK Protein in Magnetospirillum magneticum AMB-1 Encoded Outside the Genomic Magnetosome Island

Jean-Baptiste Rioux, Nadège Philippe, [ ... ], Nicolas Ginet

Intravaginal Practices, Vaginal Infections and HIV Acquisition: Systematic Review and Meta-Analysis

Adriane Martin Hilber, Suzanna C. Francis, [ ... ], Nicola Low

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