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Database and informatics methods

The Association between Proximity to Animal Feeding Operations and Community Health: A Systematic Review

Annette M. O'Connor, Brent Auvermann, Danelle Bickett-Weddle, Steve Kirkhorn, Jan M. Sargeant, Alejandro Ramirez, Susanna G. Von Essen

published 10 Mar 2010

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FastTree 2 – Approximately Maximum-Likelihood Trees for Large Alignments

Morgan N. Price, Paramvir S. Dehal, Adam P. Arkin

published 10 Mar 2010

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Atomic Analysis of Protein-Protein Interfaces with Known Inhibitors: The 2P2I Database

Raphaël Bourgeas, Marie-Jeanne Basse, Xavier Morelli, Philippe Roche

published 09 Mar 2010

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Computational Study of Evolutionary Selection Pressure on Rainbow Trout Estrogen Receptors

Conrad Shyu, Celeste J. Brown, F. Marty Ytreberg

published 09 Mar 2010

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A Rapid Method for Characterization of Protein Relatedness Using Feature Vectors

Kareem Carr, Eleanor Murray, Ebenezer Armah, Rong L. He, Stephen S.-T. Yau

published 05 Mar 2010

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Putative cis-Regulatory Elements Associated with Heat Shock Genes Activated During Excystation of Cryptosporidium parvum

Benjamin Cohn, Patricio Manque, Ana M. Lara, Myrna Serrano, Nihar Sheth, Gregory Buck

published 04 Mar 2010

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Proteomic Analysis of Tardigrades: Towards a Better Understanding of Molecular Mechanisms by Anhydrobiotic Organisms

Elham Schokraie, Agnes Hotz-Wagenblatt, Uwe Warnken, Brahim Mali, Marcus Frohme, Frank Förster, Thomas Dandekar, Steffen Hengherr, Ralph O. Schill, Martina Schnölzer

published 03 Mar 2010

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Atlantic Cod Piscidin and Its Diversification through Positive Selection

Jorge M. O. Fernandes, Jareeporn Ruangsri, Viswanath Kiron

published 02 Mar 2010

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Reciprocally Coupled Residues Crucial for Protein Kinase Pak2 Activity Calculated by Statistical Coupling Analysis

Yuan-Hao Hsu, Jolinda A. Traugh

published 01 Mar 2010

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Inferring the Ancient History of the Translation Machinery and Genetic Code via Recapitulation of Ribosomal Subunit Assembly Orders

Gregory P. Fournier, Justin E. Neumann, J. Peter Gogarten

published 01 Mar 2010

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Interspecific Hybridization as a Tool to Understand Vocal Divergence: The Example of Crowing in Quail (Genus Coturnix)

Sébastien Derégnaucourt

published 26 Feb 2010

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Structural Analysis of Biodiversity

Lawrence Sirovich, Mark Y. Stoeckle, Yu Zhang

published 24 Feb 2010

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Atomic Interaction Networks in the Core of Protein Domains and Their Native Folds

Venkataramanan Soundararajan, Rahul Raman, S. Raguram, V. Sasisekharan, Ram Sasisekharan

published 23 Feb 2010

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