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Database and informatics methods

Genome-Wide Polymorphism and Comparative Analyses in the White-Tailed Deer (Odocoileus virginianus): A Model for Conservation Genomics

Christopher M. Seabury, Eric K. Bhattarai, [ ... ], Paul M. Seabury

Predicting Functions of Proteins in Mouse Based on Weighted Protein-Protein Interaction Network and Protein Hybrid Properties

Lele Hu, Tao Huang, [ ... ], Kuo-Chen Chou

Characterization of the Deleted in Autism 1 Protein Family: Implications for Studying Cognitive Disorders

Azhari Aziz, Sean P. Harrop, Naomi E. Bishop

An FPT Approach for Predicting Protein Localization from Yeast Genomic Data

Jin Wang, Chunhe Li, Erkang Wang, Xidi Wang

K70Q Adds High-Level Tenofovir Resistance to “Q151M Complex” HIV Reverse Transcriptase through the Enhanced Discrimination Mechanism

Atsuko Hachiya, Eiichi N. Kodama, [ ... ], Stefan G. Sarafianos

Large Proteins Have a Great Tendency to Aggregate but a Low Propensity to Form Amyloid Fibrils

Hassan Ramshini, Claudia Parrini, [ ... ], Fabrizio Chiti

Detection of Resistance Mutations to Antivirals Oseltamivir and Zanamivir in Avian Influenza A Viruses Isolated from Wild Birds

Goran Orozovic, Kanita Orozovic, Johan Lennerstrand, Björn Olsen

TCM Database@Taiwan: The World's Largest Traditional Chinese Medicine Database for Drug Screening In Silico

Calvin Yu-Chian Chen

PoPoolation: A Toolbox for Population Genetic Analysis of Next Generation Sequencing Data from Pooled Individuals

Robert Kofler, Pablo Orozco-terWengel, [ ... ], Christian Schlötterer

Antarctic Krill 454 Pyrosequencing Reveals Chaperone and Stress Transcriptome

Melody S. Clark, Michael A. S. Thorne, [ ... ], Stephen Moore

Sequence Alignment, Mutual Information, and Dissimilarity Measures for Constructing Phylogenies

Orion Penner, Peter Grassberger, Maya Paczuski

Evolutionary Distances in the Twilight Zone—A Rational Kernel Approach

Roland F. Schwarz, William Fletcher, [ ... ], Florian Markowetz

Robust Computational Analysis of rRNA Hypervariable Tag Datasets

Maksim Sipos, Patricio Jeraldo, [ ... ], Nigel Goldenfeld

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