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Database and informatics methods

Identification of Distant Agouti-Like Sequences and Re-Evaluation of the Evolutionary History of the Agouti-Related Peptide (AgRP)

Åke Västermark, Arunkumar Krishnan, Michael E. Houle, Robert Fredriksson, José Miguel Cerdá-Reverter, Helgi B. Schiöth

published 16 Jul 2012

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Breakdown of Phylogenetic Signal: A Survey of Microsatellite Densities in 454 Shotgun Sequences from 154 Non Model Eukaryote Species

Emese Meglécz, Gabriel Nève, Ed Biffin, Michael G. Gardner

published 16 Jul 2012

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A Generative Model for Measuring Latent Timing Structure in Motor Sequences

Christopher M. Glaze, Todd W. Troyer

published 16 Jul 2012

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Identification of a Novel Calcium Binding Motif Based on the Detection of Sequence Insertions in the Animal Peroxidase Domain of Bacterial Proteins

Saray Santamaría-Hernando, Tino Krell, María-Isabel Ramos-González

published 13 Jul 2012

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Pharyngeal Polysaccharide Deacetylases Affect Development in the Nematode C. elegans and Deacetylate Chitin In Vitro

Ronald J. Heustis, Hong K. Ng, Kenneth J. Brand, Meredith C. Rogers, Linda T. Le, Charles A. Specht, Juliet A. Fuhrman

published 13 Jul 2012

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High-Coverage ITS Primers for the DNA-Based Identification of Ascomycetes and Basidiomycetes in Environmental Samples

Hirokazu Toju, Akifumi S. Tanabe, Satoshi Yamamoto, Hirotoshi Sato

published 12 Jul 2012

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Evidence of at Least Two Introductions of HIV-1 in the Amerindian Warao Population from Venezuela

Héctor R. Rangel, Mailis Maes, Julian Villalba, Yoneira Sulbarán, Jacobus H. de Waard, Gonzalo Bello, Flor H. Pujol

published 12 Jul 2012

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Ipomoelin, a Jacalin-Related Lectin with a Compact Tetrameric Association and Versatile Carbohydrate Binding Properties Regulated by Its N Terminus

Wei-Chieh Chang, Kai-Lun Liu, Fang-Ciao Hsu, Shih-Tong Jeng, Yi-Sheng Cheng

published 11 Jul 2012

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Evidence for a Non-Catalytic Ion-Binding Site in Multiple RNA-Dependent RNA Polymerases

Heli A. M. Mönttinen, Janne J. Ravantti, Minna M. Poranen

published 11 Jul 2012

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A Degenerate Primer MOB Typing (DPMT) Method to Classify Gamma-Proteobacterial Plasmids in Clinical and Environmental Settings

Andrés Alvarado, M. Pilar Garcillán-Barcia, Fernando de la Cruz

published 11 Jul 2012

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An Automated Flow for Directed Evolution Based on Detection of Promiscuous Scaffolds Using Spatial and Electrostatic Properties of Catalytic Residues

Sandeep Chakraborty

published 11 Jul 2012

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A Two-Staged Model of Na⁺ Exclusion in Rice Explained by 3D Modeling of HKT Transporters and Alternative Splicing

Olivier Cotsaftis, Darren Plett, Neil Shirley, Mark Tester, Maria Hrmova

published 11 Jul 2012

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Assessing Whether Alpha-Tubulin Sequences Are Suitable for Phylogenetic Reconstruction of Ciliophora with Insights into Its Evolution in Euplotids

Zhenzhen Yi, Laura A. Katz, Weibo Song

published 10 Jul 2012

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