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Database and informatics methods

Identification of Distant Agouti-Like Sequences and Re-Evaluation of the Evolutionary History of the Agouti-Related Peptide (AgRP)

Åke Västermark, Arunkumar Krishnan, [ ... ], Helgi B. Schiöth

Breakdown of Phylogenetic Signal: A Survey of Microsatellite Densities in 454 Shotgun Sequences from 154 Non Model Eukaryote Species

Emese Meglécz, Gabriel Nève, Ed Biffin, Michael G. Gardner

A Generative Model for Measuring Latent Timing Structure in Motor Sequences

Christopher M. Glaze, Todd W. Troyer

Identification of a Novel Calcium Binding Motif Based on the Detection of Sequence Insertions in the Animal Peroxidase Domain of Bacterial Proteins

Saray Santamaría-Hernando, Tino Krell, María-Isabel Ramos-González

Pharyngeal Polysaccharide Deacetylases Affect Development in the Nematode C. elegans and Deacetylate Chitin In Vitro

Ronald J. Heustis, Hong K. Ng, [ ... ], Juliet A. Fuhrman

High-Coverage ITS Primers for the DNA-Based Identification of Ascomycetes and Basidiomycetes in Environmental Samples

Hirokazu Toju, Akifumi S. Tanabe, Satoshi Yamamoto, Hirotoshi Sato

Evidence of at Least Two Introductions of HIV-1 in the Amerindian Warao Population from Venezuela

Héctor R. Rangel, Mailis Maes, [ ... ], Flor H. Pujol

Ipomoelin, a Jacalin-Related Lectin with a Compact Tetrameric Association and Versatile Carbohydrate Binding Properties Regulated by Its N Terminus

Wei-Chieh Chang, Kai-Lun Liu, [ ... ], Yi-Sheng Cheng

Evidence for a Non-Catalytic Ion-Binding Site in Multiple RNA-Dependent RNA Polymerases

Heli A. M. Mönttinen, Janne J. Ravantti, Minna M. Poranen

A Degenerate Primer MOB Typing (DPMT) Method to Classify Gamma-Proteobacterial Plasmids in Clinical and Environmental Settings

Andrés Alvarado, M. Pilar Garcillán-Barcia, Fernando de la Cruz

An Automated Flow for Directed Evolution Based on Detection of Promiscuous Scaffolds Using Spatial and Electrostatic Properties of Catalytic Residues

Sandeep Chakraborty

A Two-Staged Model of Na⁺ Exclusion in Rice Explained by 3D Modeling of HKT Transporters and Alternative Splicing

Olivier Cotsaftis, Darren Plett, [ ... ], Maria Hrmova

Assessing Whether Alpha-Tubulin Sequences Are Suitable for Phylogenetic Reconstruction of Ciliophora with Insights into Its Evolution in Euplotids

Zhenzhen Yi, Laura A. Katz, Weibo Song

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