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Database and informatics methods

Mapping the Mutual Information Network of Enzymatic Families in the Protein Structure to Unveil Functional Features

Daniel Aguilar, Baldo Oliva, Cristina Marino Buslje

published 25 Jul 2012

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Insight into Role of Selection in the Evolution of Polyglutamine Tracts in Humans

Hongwei Li, Jing Liu, Keliang Wu, Yuan Chen

published 25 Jul 2012

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Recombination in Hepatitis C Virus: Identification of Four Novel Naturally Occurring Inter-Subtype Recombinants

Weifeng Shi, Ines T. Freitas, Chaodong Zhu, Wei Zheng, William W. Hall, Desmond G. Higgins

published 24 Jul 2012

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qPMS7: A Fast Algorithm for Finding (ℓ, d)-Motifs in DNA and Protein Sequences

Hieu Dinh, Sanguthevar Rajasekaran, Jaime Davila

published 24 Jul 2012

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Sequencing of Seven Haloarchaeal Genomes Reveals Patterns of Genomic Flux

Erin A. Lynch, Morgan G. I. Langille, Aaron Darling, Elizabeth G. Wilbanks, Caitlin Haltiner, Katie S. Y. Shao, Michael O. Starr, Clotilde Teiling, Timothy T. Harkins, Robert A. Edwards, Jonathan A. Eisen, Marc T. Facciotti

published 24 Jul 2012

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Characterization and Whole Genome Analysis of Human Papillomavirus Type 16 E1-1374^∧63nt Variants

Ivan Sabol, Mihaela Matovina, Ali Si-Mohamed, Magdalena Grce

published 24 Jul 2012

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The Complete Genome Sequence of Natrinema sp. J7-2, a Haloarchaeon Capable of Growth on Synthetic Media without Amino Acid Supplements

Jie Feng, Bin Liu, Ziqian Zhang, Yan Ren, Yang Li, Fei Gan, Yuping Huang, Xiangdong Chen, Ping Shen, Lei Wang, Bing Tang, Xiao-Feng Tang

published 23 Jul 2012

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Content Factor: A Measure of a Journal’s Contribution to Knowledge

Joseph Bernstein, Chancellor F. Gray

published 23 Jul 2012

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Identifying Protein Phosphorylation Sites with Kinase Substrate Specificity on Human Viruses

Neil Arvin Bretaña, Cheng-Tsung Lu, Chiu-Yun Chiang, Min-Gang Su, Kai-Yao Huang, Tzong-Yi Lee, Shun-Long Weng

published 23 Jul 2012

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Advanced Methylome Analysis after Bisulfite Deep Sequencing: An Example in Arabidopsis

Huy Q. Dinh, Manu Dubin, Fritz J. Sedlazeck, Nicole Lettner, Ortrun Mittelsten Scheid, Arndt von Haeseler

published 20 Jul 2012

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A Functional +61G/A Polymorphism in Epidermal Growth Factor Is Associated with Glioma Risk among Asians

Xin Xu, Lei Xi, Jie Zeng, Qinhong Yao

published 19 Jul 2012

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Structure-Function Analysis of Rgs1 in Magnaporthe oryzae: Role of DEP Domains in Subcellular Targeting

Ravikrishna Ramanujam, Xu Yishi, Hao Liu, Naweed I. Naqvi

published 19 Jul 2012

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Neural Repetition Effects in the Medial Temporal Lobe Complex are Modulated by Previous Encoding Experience

Ciara M. Greene, David Soto

published 19 Jul 2012

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