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Database and informatics methods

Zinc Finger Binding Motifs Do Not Explain Recombination Rate Variation within or between Species of Drosophila

Caiti S. S. Heil, Mohamed A. F. Noor

published 18 Sep 2012

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Sequencing and Characterization of Striped Venus Transcriptome Expand Resources for Clam Fishery Genetics

Alessandro Coppe, Stefania Bortoluzzi, Giulia Murari, Ilaria Anna Maria Marino, Lorenzo Zane, Chiara Papetti

published 18 Sep 2012

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Evaluating Caveolin Interactions: Do Proteins Interact with the Caveolin Scaffolding Domain through a Widespread Aromatic Residue-Rich Motif?

Dominic P. Byrne, Caroline Dart, Daniel J. Rigden

published 17 Sep 2012

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“Seed-Milarity” Confers to hsa-miR-210 and hsa-miR-147b Similar Functional Activity

Thomas Bertero, Sébastien Grosso, Karine Robbe-Sermesant, Kevin Lebrigand, Imene-Sarah Hénaoui, Marie-Pierre Puisségur, Sandra Fourre, Laure-Emmanuelle Zaragosi, Nathalie M. Mazure, Gilles Ponzio, Bruno Cardinaud, Pascal Barbry, Roger Rezzonico, Bernard Mari

published 13 Sep 2012

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Computational Prediction of Polycomb-Associated Long Non-Coding RNAs

Galina V. Glazko, Boris L. Zybailov, Igor B. Rogozin

published 13 Sep 2012

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MyDas, an Extensible Java DAS Server

Gustavo A. Salazar, Leyla J. García, Philip Jones, Rafael C. Jimenez, Antony F. Quinn, Andrew M. Jenkinson, Nicola Mulder, Maria Martin, Sarah Hunter, Henning Hermjakob

published 13 Sep 2012

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PHYMYCO-DB: A Curated Database for Analyses of Fungal Diversity and Evolution

Stéphane Mahé, Marie Duhamel, Thomas Le Calvez, Laetitia Guillot, Ludmila Sarbu, Anthony Bretaudeau, Olivier Collin, Alexis Dufresne, E. Toby Kiers, Philippe Vandenkoornhuyse

published 13 Sep 2012

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Manipulating Fatty Acid Biosynthesis in Microalgae for Biofuel through Protein-Protein Interactions

Jillian L. Blatti, Joris Beld, Craig A. Behnke, Michael Mendez, Stephen P. Mayfield, Michael D. Burkart

published 13 Sep 2012

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Proteomic and Systems Biology Analysis of Monocytes Exposed to Securinine, a GABA_A Receptor Antagonist and Immune Adjuvant

Matt Shipman, Kirk Lubick, David Fouchard, Rajani Guram, Paul Grieco, Mark Jutila, Edward A. Dratz

published 13 Sep 2012

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Deep Sequencing of the Transcriptomes of Soybean Aphid and Associated Endosymbionts

Sijun Liu, Nanasaheb P. Chougule, Diveena Vijayendran, Bryony C. Bonning

published 12 Sep 2012

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Insect Innate Immunity Database (IIID): An Annotation Tool for Identifying Immune Genes in Insect Genomes

Robert M. Brucker, Lisa J. Funkhouser, Shefali Setia, Rini Pauly, Seth R. Bordenstein

published 12 Sep 2012

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Identification of Drug Resistant Mutations in HIV-1 CRF07_BC Variants Selected by Nevirapine In Vitro

Hao Wu, Hao-Jie Zhang, Xiao-min Zhang, Hui-fang Xu, Ming Wang, Jian-dong Huang, Bo-Jian Zheng

published 12 Sep 2012

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Evolutionary Conservation of the Ribosomal Biogenesis Factor Rbm19/Mrd1: Implications for Function

Yvonne Kallberg, Åsa Segerstolpe, Fredrik Lackmann, Bengt Persson, Lars Wieslander

published 12 Sep 2012

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