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Database and informatics methods

Stallion Sperm Transcriptome Comprises Functionally Coherent Coding and Regulatory RNAs as Revealed by Microarray Analysis and RNA-seq

Pranab J. Das, Fiona McCarthy, Monika Vishnoi, Nandina Paria, Cathy Gresham, Gang Li, Priyanka Kachroo, A. Kendrick Sudderth, Sheila Teague, Charles C. Love, Dickson D. Varner, Bhanu P. Chowdhary, Terje Raudsepp

published 11 Feb 2013

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Multi-Species Comparative Analysis of the Equine ACE Gene Identifies a Highly Conserved Potential Transcription Factor Binding Site in Intron 16

Natasha A. Hamilton, Imke Tammen, Herman W. Raadsma

published 08 Feb 2013

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Phylogenomics and Molecular Signatures for Species from the Plant Pathogen-Containing Order Xanthomonadales

Hafiz Sohail Naushad, Radhey S. Gupta

published 08 Feb 2013

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Conservation and Sex-Specific Splicing of the transformer Gene in the Calliphorids Cochliomyia hominivorax, Cochliomyia macellaria and Lucilia sericata

Fang Li, Steven P. Vensko II, Esther J. Belikoff, Maxwell J. Scott

published 07 Feb 2013

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Presence of Terminal EPIYA Phosphorylation Motifs in Helicobacter pylori CagA Contributes to IL-8 Secretion, Irrespective of the Number of Repeats

Konstantinos S. Papadakos, Ioanna S. Sougleri, Andreas F. Mentis, Efstathios Hatziloukas, Dionyssios N. Sgouras

published 07 Feb 2013

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Dramatic Structural Changes Resulting from the Loss of a Crucial Hydrogen Bond in the Hinge Region Involved in C-Terminal Helix Swapping in SurE: A Survival Protein from Salmonella typhimurium

Yamuna Kalyani Mathiharan, Anju Pappachan, H. S. Savithri, Mathur R. N. Murthy

published 07 Feb 2013

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Rapid Genome Mapping in Nanochannel Arrays for Highly Complete and Accurate De Novo Sequence Assembly of the Complex Aegilops tauschii Genome

Alex R. Hastie, Lingli Dong, Alexis Smith, Jeff Finklestein, Ernest T. Lam, Naxin Huo, Han Cao, Pui-Yan Kwok, Karin R. Deal, Jan Dvorak, Ming-Cheng Luo, Yong Gu, Ming Xiao

published 06 Feb 2013

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Transcriptome Profiling of the Goose (Anser cygnoides) Ovaries Identify Laying and Broodiness Phenotypes

Qi Xu, WenMing Zhao, Yang Chen, YiYu Tong, GuangHui Rong, ZhengYang Huang, Yang Zhang, GuoBing Chang, XinSheng Wu, GuoHong Chen

published 06 Feb 2013

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Comparison of Sequencing Platforms for Single Nucleotide Variant Calls in a Human Sample

Aakrosh Ratan, Webb Miller, Joseph Guillory, Jeremy Stinson, Somasekar Seshagiri, Stephan C. Schuster

published 06 Feb 2013

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What Is the Role of Informal Healthcare Providers in Developing Countries? A Systematic Review

May Sudhinaraset, Matthew Ingram, Heather Kinlaw Lofthouse, Dominic Montagu

published 06 Feb 2013

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Dinitrogen Fixation Is Restricted to the Terminal Heterocysts in the Invasive Cyanobacterium Cylindrospermopsis raciborskii CS-505

Álvaro M. Plominsky, John Larsson, Birgitta Bergman, Nathalie Delherbe, Igor Osses, Mónica Vásquez

published 06 Feb 2013

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Complete Genome Sequences of New Xenotropic Murine Leukemia Viruses from the Senescence-Accelerated Mouse (SAM): Molecular and Phylogenetic Analyses

Yun-Jung Lee, Byung-Hoon Jeong, Eun-Kyoung Choi, Richard I. Carp, Yong-Sun Kim

published 05 Feb 2013

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Discovery of Glycoside Hydrolase Enzymes in an Avicel-Adapted Forest Soil Fungal Community by a Metatranscriptomic Approach

Kazuto Takasaki, Takamasa Miura, Manabu Kanno, Hideyuki Tamaki, Satoshi Hanada, Yoichi Kamagata, Nobutada Kimura

published 05 Feb 2013

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