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Database and informatics methods

Alignment of Helical Membrane Protein Sequences Using AlignMe

Marcus Stamm, René Staritzbichler, Kamil Khafizov, Lucy R. Forrest

published 04 Mar 2013

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TagGD: Fast and Accurate Software for DNA Tag Generation and Demultiplexing

Paul Igor Costea, Joakim Lundeberg, Pelin Akan

published 04 Mar 2013

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De novo Transcriptome Sequencing Reveals a Considerable Bias in the Incidence of Simple Sequence Repeats towards the Downstream of ‘Pre-miRNAs’ of Black Pepper

Nisha Joy, Srinivasan Asha, Vijayan Mallika, Eppurathu Vasudevan Soniya

published 04 Mar 2013

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Digging the New York City Skyline: Soil Fungal Communities in Green Roofs and City Parks

Krista L. McGuire, Sara G. Payne, Matthew I. Palmer, Caitlyn M. Gillikin, Dominique Keefe, Su Jin Kim, Seren M. Gedallovich, Julia Discenza, Ramya Rangamannar, Jennifer A. Koshner, Audrey L. Massmann, Giulia Orazi, Adam Essene, Jonathan W. Leff, Noah Fierer

published 01 Mar 2013

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PyroClean: Denoising Pyrosequences from Protein-Coding Amplicons for the Recovery of Interspecific and Intraspecific Genetic Variation

Ricardo Ramirez-Gonzalez, Douglas W. Yu, Catharine Bruce, Darren Heavens, Mario Caccamo, Brent C. Emerson

published 01 Mar 2013

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Comprehensive Analysis of BRCA1, BRCA2 and TP53 Germline Mutation and Tumor Characterization: A Portrait of Early-Onset Breast Cancer in Brazil

Dirce Maria Carraro, Maria Aparecida Azevedo Koike Folgueira, Bianca Cristina Garcia Lisboa, Eloisa Helena Ribeiro Olivieri, Ana Cristina Vitorino Krepischi, Alex Fiorini de Carvalho, Louise Danielle de Carvalho Mota, Renato David Puga, Maria do Socorro Maciel, Rodrigo Augusto Depieri Michelli, Eduardo Carneiro de Lyra, Stana Helena Giorgi Grosso, Fernando Augusto Soares, Maria Isabel Alves de Souza Waddington Achatz, Helena Brentani, Carlos Alberto Moreira-Filho, Maria Mitzi Brentani

published 01 Mar 2013

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A Clinically Integrated Post-Graduate Training Programme in Evidence-Based Medicine versus ‘No Intervention’ for Improving Disability Evaluations: A Cluster Randomised Clinical Trial

Rob Kok, Jan L. Hoving, Paul B. A. Smits, Sarah M. Ketelaar, Frank J. H. van Dijk, Jos H. Verbeek

published 01 Mar 2013

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Distinguishing Body Lice from Head Lice by Multiplex Real-Time PCR Analysis of the Phum_PHUM540560 Gene

Rezak Drali, Amina Boutellis, Didier Raoult, Jean Marc Rolain, Philippe Brouqui

published 28 Feb 2013

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Intracoronary versus Intravenous Administration of Abciximab in Patients with Acute Coronary Syndrome: A Meta-Analysis

Jie-Ning Wang, Shu Diao, Yuan-Jun Tang, An-Ji Hou, Hai-Bo Yuan, Yan Zheng, Yu-Hao Zhou

published 28 Feb 2013

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EM Structure of the Ectodomain of Integrin CD11b/CD18 and Localization of Its Ligand-Binding Site Relative to the Plasma Membrane

Brian D. Adair, Jian-Ping Xiong, José Luis Alonso, Bradley T. Hyman, M. Amin Arnaout

published 28 Feb 2013

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Contribution of V_H Replacement Products in Mouse Antibody Repertoire

Lin Huang, Miles D. Lange, Yangsheng Yu, Song Li, Kaihong Su, Zhixin Zhang

published 28 Feb 2013

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De Novo Assembly, Gene Annotation and Marker Development Using Illumina Paired-End Transcriptome Sequences in Celery (Apium graveolens L.)

Nan Fu, Qian Wang, Huo-Lin Shen

published 28 Feb 2013

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Towards Improved Quality of GPCR Models by Usage of Multiple Templates and Profile-Profile Comparison

Dorota Latek, Pawel Pasznik, Teresa Carlomagno, Slawomir Filipek

published 28 Feb 2013

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