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Database and informatics methods

Transcriptome Analysis of Buds and Leaves Using 454 Pyrosequencing to Discover Genes Associated with the Biosynthesis of Active Ingredients in Lonicera japonica Thunb.

Liu He, Xiaolan Xu, Ying Li, Chunfang Li, Yingjie Zhu, Haixia Yan, Zhiying Sun, Chao Sun, Jingyuan Song, Yu’an Bi, Juan Shen, Ruiyang Cheng, Zhenzhong Wang, Wei Xiao, Shilin Chen

published 25 Apr 2013

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Phylogeny of Bacterial and Archaeal Genomes Using Conserved Genes: Supertrees and Supermatrices

Jenna Morgan Lang, Aaron E. Darling, Jonathan A. Eisen

published 25 Apr 2013

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Bioinformatics Analysis Identify Novel OB Fold Protein Coding Genes in C. elegans

Daryanaz Dargahi, David Baillie, Frederic Pio

published 25 Apr 2013

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Conserved N-Terminal Negative Charges Support Optimally Efficient N-type Inactivation of Kv1 Channels

Alison Prince, Paul J. Pfaffinger

published 24 Apr 2013

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A Satellite Explosion in the Genome of Holocentric Nematodes

Juan A. Subirana, Xavier Messeguer

published 24 Apr 2013

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A Study of the Mechanism of the Chaperone-like Function of an scFv of Human Creatine Kinase by Computer Simulation

Jianyu Feng, Hong Guo, Sen Li, Tun Lu

published 24 Apr 2013

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Metagenomic Analysis of a Tropical Composting Operation at the São Paulo Zoo Park Reveals Diversity of Biomass Degradation Functions and Organisms

Layla Farage Martins, Luciana Principal Antunes, Renata C. Pascon, Julio Cezar Franco de Oliveira, Luciano A. Digiampietri, Deibs Barbosa, Bruno Malveira Peixoto, Marcelo A. Vallim, Cristina Viana-Niero, Eric H. Ostroski, Guilherme P. Telles, Zanoni Dias, João Batista da Cruz, Luiz Juliano, Sergio Verjovski-Almeida, Aline Maria da Silva, João Carlos Setubal

published 24 Apr 2013

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A Plea for Neutral Comparison Studies in Computational Sciences

Anne-Laure Boulesteix, Sabine Lauer, Manuel J. A. Eugster

published 24 Apr 2013

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A Comprehensive Search for Recombinogenic Motifs in the Human Genome

Henry R. Johnston, David J. Cutler

published 23 Apr 2013

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Molecular Clone and Expression of a NAD⁺-Dependent Glycerol-3-Phosphate Dehydrogenase Isozyme Gene from the Halotolerant alga Dunaliella salina

Ma Cai, Li-Hong He, Tu-Yuan Yu

published 23 Apr 2013

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Identification of Functional Mutations in GATA4 in Patients with Congenital Heart Disease

Erli Wang, Shuna Sun, Bin Qiao, Wenyuan Duan, Guoying Huang, Yu An, Shuhua Xu, Yufang Zheng, Zhixi Su, Xun Gu, Li Jin, Hongyan Wang

published 23 Apr 2013

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Effects of Tai Chi in Patients with Chronic Obstructive Pulmonary Disease: Preliminary Evidence

Jun-Hong Yan, Yong-Zhong Guo, Hong-Mei Yao, Lei Pan

published 23 Apr 2013

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CNNcon: Improved Protein Contact Maps Prediction Using Cascaded Neural Networks

Wang Ding, Jiang Xie, Dongbo Dai, Huiran Zhang, Hao Xie, Wu Zhang

published 23 Apr 2013

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