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Database and informatics methods

Inferring Epitopes of a Polymorphic Antigen Amidst Broadly Cross-Reactive Antibodies Using Protein Microarrays: A Study of OspC Proteins of Borrelia burgdorferi

Elisabeth Baum, Arlo Z. Randall, Michael Zeller, Alan G. Barbour

Complete Mitochondrial DNA Sequences of the Threadfin Cichlid (Petrochromis trewavasae) and the Blunthead Cichlid (Tropheus moorii) and Patterns of Mitochondrial Genome Evolution in Cichlid Fishes

Christoph Fischer, Stephan Koblmüller, [ ... ], Gerhard G. Thallinger

Shotgun Proteomics Identifies Serum Fibronectin as a Candidate Diagnostic Biomarker for Inclusion in Future Multiplex Tests for Ectopic Pregnancy

Jeremy K. Brown, Katarina B. Lauer, [ ... ], Andrew W. Horne

Genomer — A Swiss Army Knife for Genome Scaffolding

Michael D. Barton, Hazel A. Barton

When the Body Hides the Ancestry: Phylogeny of Morphologically Modified Epizoic Earwigs Based on Molecular Evidence

Petr Kocarek, Vaclav John, Pavel Hulva

Evaluating the Impact of Sequencing Depth on Transcriptome Profiling in Human Adipose

Yichuan Liu, Jane F. Ferguson, [ ... ], Mingyao Li

Compensatory Base Changes in ITS2 Secondary Structures Correlate with the Biological Species Concept Despite Intragenomic Variability in ITS2 Sequences – A Proof of Concept

Matthias Wolf, Shilin Chen, [ ... ], Tobias Müller

An Experimental and Computational Evolution-Based Method to Study a Mode of Co-evolution of Overlapping Open Reading Frames in the AAV2 Viral Genome

Yasuhiro Kawano, Shane Neeley, Kei Adachi, Hiroyuki Nakai

A Practical Approach Based on Analytic Deformable Algorithm for Scenic Image Registration

Wei-Yen Hsu

Lack of Structural Variation but Extensive Length Polymorphisms and Heteroplasmic Length Variations in the Mitochondrial DNA Control Region of Highly Inbred Crested Ibis, Nipponia nippon

Xue-Lian He, Chang-Qing Ding, Jian-Lin Han

Functional Integration of the Conserved Domains of Shoc2 Scaffold

Myoungkun Jeoung, Lina Abdelmoti, [ ... ], Emilia Galperin

Drug Promiscuity in PDB: Protein Binding Site Similarity Is Key

V. Joachim Haupt, Simone Daminelli, Michael Schroeder

The Hemolymph Proteome of Fed and Starved Drosophila Larvae

Björn Handke, Ingrid Poernbacher, [ ... ], Christian F. Lehner

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