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Computer and information sciences

Conceptual Modeling in Systems Biology Fosters Empirical Findings: The mRNA Lifecycle

Dov Dori, Mordechai Choder

published 12 Sep 2007

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An Amphioxus Gli Gene Reveals Conservation of Midline Patterning and the Evolution of Hedgehog Signalling Diversity in Chordates

Sebastian M. Shimeld, Marcel van den Heuvel, Rebecca Dawber, James Briscoe

published 12 Sep 2007

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Beringian Standstill and Spread of Native American Founders

Erika Tamm, Toomas Kivisild, Maere Reidla, Mait Metspalu, David Glenn Smith, Connie J. Mulligan, Claudio M. Bravi, Olga Rickards, Cristina Martinez-Labarga, Elsa K. Khusnutdinova, Sardana A. Fedorova, Maria V. Golubenko, Vadim A. Stepanov, Marina A. Gubina, Sergey I. Zhadanov, Ludmila P. Ossipova, Larisa Damba, Mikhail I. Voevoda, Jose E. Dipierri, Richard Villems, Ripan S. Malhi

published 05 Sep 2007

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Preference of Small Molecules for Local Minimum Conformations when Binding to Proteins

Qi Wang, Yuan-Ping Pang

published 05 Sep 2007

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Distinguishing Functional Amino Acid Covariation from Background Linkage Disequilibrium in HIV Protease and Reverse Transcriptase

Qi Wang, Christopher Lee

published 29 Aug 2007

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NetMHCpan, a Method for Quantitative Predictions of Peptide Binding to Any HLA-A and -B Locus Protein of Known Sequence

Morten Nielsen, Claus Lundegaard, Thomas Blicher, Kasper Lamberth, Mikkel Harndahl, Sune Justesen, Gustav Røder, Bjoern Peters, Alessandro Sette, Ole Lund, Søren Buus

published 29 Aug 2007

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Patterns of Selection in Anti-Malarial Immune Genes in Malaria Vectors: Evidence for Adaptive Evolution in LRIM1 in Anopheles arabiensis

Michel A. Slotman, Aristeidis Parmakelis, Jonathon C. Marshall, Parfait H. Awono-Ambene, Christophe Antonio-Nkondjo, Frederic Simard, Adalgisa Caccone, Jeffrey R. Powell

published 29 Aug 2007

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Phylogenomics Reshuffles the Eukaryotic Supergroups

Fabien Burki, Kamran Shalchian-Tabrizi, Marianne Minge, Åsmund Skjæveland, Sergey I. Nikolaev, Kjetill S. Jakobsen, Jan Pawlowski

published 29 Aug 2007

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Expressed Sequence Tags as a Tool for Phylogenetic Analysis of Placental Mammal Evolution

Morgan Kullberg, Björn Hallström, Ulfur Arnason, Axel Janke

published 22 Aug 2007

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Predicting Prokaryotic Ecological Niches Using Genome Sequence Analysis

Garret Suen, Barry S. Goldman, Roy D. Welch

published 15 Aug 2007

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ADaCGH: A Parallelized Web-Based Application and R Package for the Analysis of aCGH Data

Ramón Díaz-Uriarte, Oscar M. Rueda

published 15 Aug 2007

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Protistan Diversity in the Arctic: A Case of Paleoclimate Shaping Modern Biodiversity?

Thorsten Stoeck, Jennifer Kasper, John Bunge, Chesley Leslin, Valya Ilyin, Slava Epstein

published 15 Aug 2007

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Development of Neural Circuitry for Precise Temporal Sequences through Spontaneous Activity, Axon Remodeling, and Synaptic Plasticity

Joseph K. Jun, Dezhe Z. Jin

published 08 Aug 2007

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