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Comparative genomics

Identification of Gene Clusters Associated with Host Adaptation and Antibiotic Resistance in Chinese Staphylococcus aureus Isolates by Microarray-Based Comparative Genomics

Henan Li, Chunjiang Zhao, Hongbin Chen, Feifei Zhang, Wenqiang He, Xiaojuan Wang, Qi Wang, Ruifu Yang, Dongsheng Zhou, Hui Wang

published 07 Jan 2013

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Reference-Free Comparative Genomics of 174 Chloroplasts

Chai-Shian Kua, Jue Ruan, John Harting, Cheng-Xi Ye, Matthew R. Helmus, Jun Yu, Charles H. Cannon

published 20 Nov 2012

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Comparative Analysis of Genome Sequences Covering the Seven Cronobacter Species

Susan Joseph, Prerak Desai, Yongmei Ji, Craig A. Cummings, Rita Shih, Lovorka Degoricija, Alain Rico, Pius Brzoska, Stephen E. Hamby, Naqash Masood, Sumyya Hariri, Hana Sonbol, Nadia Chuzhanova, Michael McClelland, Manohar R. Furtado, Stephen J. Forsythe

published 16 Nov 2012

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GenoSets: Visual Analytic Methods for Comparative Genomics

Aurora A. Cain, Robert Kosara, Cynthia J. Gibas

published 03 Oct 2012

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Congruent Strain Specific Intestinal Persistence of Lactobacillus plantarum in an Intestine-Mimicking In Vitro System and in Human Volunteers

Hermien van Bokhorst-van de Veen, Iris van Swam, Michiel Wels, Peter A. Bron, Michiel Kleerebezem

published 06 Sep 2012

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Discovery of Stress Responsive DNA Regulatory Motifs in Arabidopsis

Shisong Ma, Shawn Bachan, Matthew Porto, Hans J. Bohnert, Michael Snyder, Savithramma P. Dinesh-Kumar

published 13 Aug 2012

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IMG/M-HMP: A Metagenome Comparative Analysis System for the Human Microbiome Project

Victor M. Markowitz, I-Min A. Chen, Ken Chu, Ernest Szeto, Krishna Palaniappan, Biju Jacob, Anna Ratner, Konstantinos Liolios, Ioanna Pagani, Marcel Huntemann, Konstantinos Mavromatis, Natalia N. Ivanova, Nikos C. Kyrpides

published 05 Jul 2012

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Genomic Islands as a Marker to Differentiate between Clinical and Environmental Burkholderia pseudomallei

Thanatchaporn Bartpho, Thidathip Wongsurawat, Surasakdi Wongratanacheewin, Adel M. Talaat, Nitsara Karoonuthaisiri, Rasana W. Sermswan

published 01 Jun 2012

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DISCO-SCA and Properly Applied GSVD as Swinging Methods to Find Common and Distinctive Processes

Katrijn Van Deun, Iven Van Mechelen, Lieven Thorrez, Martijn Schouteden, Bart De Moor, Mariët J. van der Werf, Lieven De Lathauwer, Age K. Smilde, Henk A. L. Kiers

published 31 May 2012

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Evolutionary and Experimental Assessment of Novel Markers for Detection of Xanthomonas euvesicatoria in Plant Samples

Pedro Albuquerque, Cristina M. R. Caridade, Arlete S. Rodrigues, Andre R. S. Marcal, Joana Cruz, Leonor Cruz, Catarina L. Santos, Marta V. Mendes, Fernando Tavares

published 24 May 2012

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Comparative Genomics of Mycoplasma: Analysis of Conserved Essential Genes and Diversity of the Pan-Genome

Wei Liu, Liurong Fang, Mao Li, Sha Li, Shaohua Guo, Rui Luo, Zhixin Feng, Bin Li, Zhemin Zhou, Guoqing Shao, Huanchun Chen, Shaobo Xiao

published 20 Apr 2012

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Comparative Genomics and Drug Resistance of a Geographic Variant of ST239 Methicillin-Resistant Staphylococcus aureus Emerged in Russia

Tatsuo Yamamoto, Tomomi Takano, Wataru Higuchi, Yasuhisa Iwao, Olga Singur, Ivan Reva, Yuta Otsuka, Toru Nakayashiki, Hirotada Mori, Galina Reva, Vladimir Kuznetsov, Vladimir Potapov

published 19 Jan 2012

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Use of Low-Coverage, Large-Insert, Short-Read Data for Rapid and Accurate Generation of Enhanced-Quality Draft Pseudomonas Genome Sequences

Heath E. O'Brien, Yunchen Gong, Pauline Fung, Pauline W. Wang, David S. Guttman

published 02 Nov 2011

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