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Comparative genomics

Comparative Genomics and Characterization of Hybrid Shigatoxigenic and Enterotoxigenic Escherichia coli (STEC/ETEC) Strains

Outi Nyholm, Jani Halkilahti, Gudrun Wiklund, Uche Okeke, Lars Paulin, Petri Auvinen, Kaisa Haukka, Anja Siitonen

published 27 Aug 2015

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Comparative Analysis of Codon Usage Bias Patterns in Microsporidian Genomes

Heng Xiang, Ruizhi Zhang, Robert R. Butler III, Tie Liu, Li Zhang, Jean-François Pombert, Zeyang Zhou

published 09 Jun 2015

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MiRduplexSVM: A High-Performing MiRNA-Duplex Prediction and Evaluation Methodology

Nestoras Karathanasis, Ioannis Tsamardinos, Panayiota Poirazi

published 11 May 2015

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Identification and Analysis of the Paulomycin Biosynthetic Gene Cluster and Titer Improvement of the Paulomycins in Streptomyces paulus NRRL 8115

Jine Li, Zhoujie Xie, Min Wang, Guomin Ai, Yihua Chen

published 30 Mar 2015

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Scanning the Landscape of Genome Architecture of Non-O1 and Non-O139 Vibrio cholerae by Whole Genome Mapping Reveals Extensive Population Genetic Diversity

Carol Chapman, Matthew Henry, Kimberly A. Bishop-Lilly, Joy Awosika, Adam Briska, Ryan N. Ptashkin, Trevor Wagner, Chythanya Rajanna, Hsinyi Tsang, Shannon L. Johnson, Vishwesh P. Mokashi, Patrick S. G. Chain, Shanmuga Sozhamannan

published 20 Mar 2015

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Comparative Analysis of Disease-Linked Single Nucleotide Polymorphic Markers from Brassica rapa for Their Applicability to Brassica oleracea

Young-Il Cho, Yul-Kyun Ahn, Swati Tripathi, Jeong-Ho Kim, Hye-Eun Lee, Do-Sun Kim

published 19 Mar 2015

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Pseudohypoparathyroidism Type Ib Associated with Novel Duplications in the GNAS Locus

Gustavo Perez-Nanclares, Teresa Velayos, Amaya Vela, Manuel Muñoz-Torres, Luis Castaño

published 24 Feb 2015

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Complete Genome Sequence and Comparative Genomic Analysis of Mycobacterium massiliense JCM 15300 in the Mycobacterium abscessus Group Reveal a Conserved Genomic Island MmGI-1 Related to Putative Lipid Metabolism

Tsuyoshi Sekizuka, Masanori Kai, Kazue Nakanaga, Noboru Nakata, Yuko Kazumi, Shinji Maeda, Masahiko Makino, Yoshihiko Hoshino, Makoto Kuroda

published 11 Dec 2014

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Analysis of Micro-Rearrangements in 25 Eukaryotic Species Pairs by SyntenyMapper

Stefanie Kaufmann, Dmitrij Frishman

published 06 Nov 2014

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Lactobacillus rossiae, a Vitamin B₁₂ Producer, Represents a Metabolically Versatile Species within the Genus Lactobacillus

Maria De Angelis, Francesca Bottacini, Bruno Fosso, Philip Kelleher, Maria Calasso, Raffaella Di Cagno, Marco Ventura, Ernesto Picardi, Douwe van Sinderen, Marco Gobbetti

published 29 Sep 2014

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Identification of Degenerate Nuclei and Development of a SCAR Marker for Flammulina velutipes

Sun Young Kim, Kyung-Hee Kim, Chak Han Im, Asjad Ali, Chang Yun Lee, Won-Sik Kong, Jae-San Ryu

published 15 Sep 2014

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Quickly Finding Orthologs as Reciprocal Best Hits with BLAT, LAST, and UBLAST: How Much Do We Miss?

Natalie Ward, Gabriel Moreno-Hagelsieb

published 11 Jul 2014

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Cross-Family Translational Genomics of Abiotic Stress-Responsive Genes between Arabidopsis and Medicago truncatula

Daejin Hyung, Chaeyoung Lee, Jin-Hyun Kim, Dongwoon Yoo, Young-Su Seo, Soon-Chun Jeong, Jai-Heon Lee, Youngsoo Chung, Ki-Hong Jung, Douglas R. Cook, Hong-kyu Choi

published 27 Mar 2014

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