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Comparative genomics

Exploring the Shift in Structure and Function of Microbial Communities Performing Biological Phosphorus Removal

Yanping Mao, Zhiping Wang, Liguan Li, Xiaotao Jiang, Xuxiang Zhang, Hongqiang Ren, Tong Zhang

published 22 Aug 2016

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Comparative Genomics and Metabolic Analysis Reveals Peculiar Characteristics of Rhodococcus opacus Strain M213 Particularly for Naphthalene Degradation

Ashish Pathak, Ashvini Chauhan, Jochen Blom, Karl J. Indest, Carina M. Jung, Paul Stothard, Gopal Bera, Stefan J. Green, Andrew Ogram

published 17 Aug 2016

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Tracing QTLs for Leaf Blast Resistance and Agronomic Performance of Finger Millet (Eleusine coracana (L.) Gaertn.) Genotypes through Association Mapping and in silico Comparative Genomics Analyses

M. Ramakrishnan, S. Antony Ceasar, V. Duraipandiyan, K. K. Vinod, Krishnan Kalpana, N. A. Al-Dhabi, S. Ignacimuthu

published 14 Jul 2016

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De Novo Assembly of Human Herpes Virus Type 1 (HHV-1) Genome, Mining of Non-Canonical Structures and Detection of Novel Drug-Resistance Mutations Using Short- and Long-Read Next Generation Sequencing Technologies

Timokratis Karamitros, Ian Harrison, Renata Piorkowska, Aris Katzourakis, Gkikas Magiorkinis, Jean Lutamyo Mbisa

published 16 Jun 2016

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GapBlaster—A Graphical Gap Filler for Prokaryote Genomes

Pablo H. C. G. de Sá, Fábio Miranda, Adonney Veras, Diego Magalhães de Melo, Siomar Soares, Kenny Pinheiro, Luis Guimarães, Vasco Azevedo, Artur Silva, Rommel T. J. Ramos

published 12 May 2016

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StreptoBase: An Oral Streptococcus mitis Group Genomic Resource and Analysis Platform

Wenning Zheng, Tze King Tan, Ian C. Paterson, Naresh V. R. Mutha, Cheuk Chuen Siow, Shi Yang Tan, Lesley A. Old, Nicholas S. Jakubovics, Siew Woh Choo

published 03 May 2016

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Genomic Characteristics of Chinese Borrelia burgdorferi Isolates

Qin Hao, Pengcheng Du, Wen Zhang, Xuexia Hou, Lin Zhang, Yuanyuan Zhang, Huixin Liu, Wei Liu, Chen Chen, Kanglin Wan

published 19 Apr 2016

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The Identification of Novel Diagnostic Marker Genes for the Detection of Beer Spoiling Pediococcus damnosus Strains Using the BlAst Diagnostic Gene findEr

Jürgen Behr, Andreas J. Geissler, Jonas Schmid, Anja Zehe, Rudi F. Vogel

published 30 Mar 2016

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Comparative Genomic Analysis of Escherichia coli O157:H7 Isolated from Super-Shedder and Low-Shedder Cattle

Krysty D. Munns, Rahat Zaheer, Yong Xu, Kim Stanford, Chad R. Laing, Victor P. J. Gannon, L. Brent Selinger, Tim A. McAllister

published 28 Mar 2016

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Development of a Rhizoctonia solani AG1-IB Specific Gene Model Enables Comparative Genome Analyses between Phytopathogenic R. solani AG1-IA, AG1-IB, AG3 and AG8 Isolates

Daniel Wibberg, Oliver Rupp, Jochen Blom, Lukas Jelonek, Magdalena Kröber, Bart Verwaaijen, Alexander Goesmann, Stefan Albaum, Rita Grosch, Alfred Pühler, Andreas Schlüter

published 21 Dec 2015

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Genome Analysis of Pseudomonas fluorescens PCL1751: A Rhizobacterium that Controls Root Diseases and Alleviates Salt Stress for Its Plant Host

Shu-Ting Cho, Hsing-Hua Chang, Dilfuza Egamberdieva, Faina Kamilova, Ben Lugtenberg, Chih-Horng Kuo

published 09 Oct 2015

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Complete Genome Sequence of a High Lipid-Producing Strain of Mucor circinelloides WJ11 and Comparative Genome Analysis with a Low Lipid-Producing Strain CBS 277.49

Xin Tang, Lina Zhao, Haiqin Chen, Yong Q. Chen, Wei Chen, Yuanda Song, Colin Ratledge

published 09 Sep 2015

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Comparative Genomics and Characterization of Hybrid Shigatoxigenic and Enterotoxigenic Escherichia coli (STEC/ETEC) Strains

Outi Nyholm, Jani Halkilahti, Gudrun Wiklund, Uche Okeke, Lars Paulin, Petri Auvinen, Kaisa Haukka, Anja Siitonen

published 27 Aug 2015

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