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Chromatin immunoprecipitation

Predicting chromatin conformation contact maps

Alan Min, Jacob Schreiber, Anshul Kundaje, William S. Noble

published 29 Sep 2025

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An in silico procedure for generating protein-mediated chromatin interaction data and comparison of significant interaction calling methods

Shuyuan Lou, Shili Lin

published 17 Jan 2024

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Regulation of inflammatory genes in decidual cells: Involvement of the bromodomain and extra-terminal family proteins

Sandeep Ajgaonkar, Jonathan J. Hirst, Mary Norris, Tamas Zakar

published 10 Mar 2023

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ATF4 promotes brain vascular smooth muscle cells proliferation, invasion and migration by targeting miR-552-SKI axis

Meina Feng, Qin Zhou, Wenxian Tu, Yunfeng Wang, Yuanmin Du, Kang Xu

published 20 Jul 2022

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PEREGRINE: A genome-wide prediction of enhancer to gene relationships supported by experimental evidence

Caitlin Mills, Anushya Muruganujan, Dustin Ebert, Crystal N. Marconett, Juan Pablo Lewinger, Paul D. Thomas, Huaiyu Mi

published 15 Dec 2020

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Model-based analysis of chromatin interactions from dCas9-Based CAPTURE-3C-seq

Yong Chen, Yunfei Wang, Xin Liu, Jian Xu, Michael Q. Zhang

published 31 Jul 2020

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A 100 bp GAGA motif-containing sequence in AGAMOUS second intron is able to suppress the activity of CaMV35S enhancer in vegetative tissues

Ruochen Liu, Xiuping Zou, You Wang, Qin Long, Yan Pei

published 05 Mar 2020

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Assessing the binding properties of the anti-PD-1 antibody landscape using label-free biosensors

Michael E. Brown, Daniel Bedinger, Asparouh Lilov, Palaniswami Rathanaswami, Maximiliano Vásquez, Stéphanie Durand, Ian Wallace-Moyer, Lihui Zhong, Juergen H. Nett, Irina Burnina, Isabelle Caffry, Heather Lynaugh, Melanie Sinclair, Tingwan Sun, John Bukowski, Yingda Xu, Yasmina Noubia Abdiche

published 05 Mar 2020

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Point-of-care diagnostic (POCD) method for detecting Bursaphelenchus xylophilus in pinewood using recombinase polymerase amplification (RPA) with the portable optical isothermal device (POID)

Deokjea Cha, Dongsoo Kim, Wonil Choi, Sungjun Park, Hyerim Han

published 14 Jan 2020

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Population size estimation for quality control of ChIP-Seq datasets

Semyon K. Kolmykov, Yury V. Kondrakhin, Ivan S. Yevshin, Ruslan N. Sharipov, Anna S. Ryabova, Fedor A. Kolpakov

published 29 Aug 2019

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Evidence that 6q25.1 variant rs6931104 confers susceptibility to chronic myeloid leukemia through RMND1 regulation

Young Min Woo, Sehwa Kim, Jong-Ho Park, Nan Young Lee, Jong-Won Kim, Dennis Dong Hwan Kim

published 25 Jun 2019

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The transcription elongation factor TCEA3 promotes the activity of the myogenic regulatory factors

Noor Kazim, Abhinav Adhikari, Judith Davie

published 03 Jun 2019

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PTGDR expression is upregulated through retinoic acid receptors (RAR) mechanism in allergy

Asunción García-Sánchez, Elena Marcos-Vadillo, Catalina Sanz, Miguel Estravís, María Isidoro-García, Ignacio Dávila

published 15 Apr 2019

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