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Biological databases

Knowledge gap in vertebrate genetic diversity in a northern remanent of neotropical rainforest

David José Martínez Cano, Víctor Hugo Reynoso, María de Lourdes Vázquez-Cruz, Edyciel Jordán Alvarado-Robledo, Yesenia Ithaí Ángeles-López, Eugenia Zarza

published 03 Nov 2026

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Mutation-resolved ABL1 inhibitor resistance prediction under mutation-disjoint and temporal cross-study validation

Mohanad A. Deif, Mohamed A. Hafez, Mohammad Khishe, Ahmed Solyman, Ismail A. M. Elhaty

published 27 Oct 2026

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Structure bioinformatics of eight human ATP synthase F₀ subunits and their AlphaFold3-predicted reduced-hydrophobicity QTY analogues

Ziyu Wang, Edward Chen, Shuguang Zhang

published 23 Oct 2026

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Investigating the anticancer potential of phytochemicals from the mangrove Rhizophora mucronata as inhibitors of lung cancer-associated proteins: Insights from multiscale computational and in silico analyses

Zena Abdul-Ameer Mahdi, Batool Shakir Abed AlmjalawI, Mollah Naimuzzaman, Md Mahabub Hasan, Ajoy Kumer, Farah Tareq Al-Alaq, Hussein O.M. Al-Dahmoshi, Faizur Rahman, Md. Fayez Al-Hakim Khan, Noor S.K. Al-Khafaji, Sarah Alwan Malik Al-Yasiri

published 07 Oct 2026

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Codon-aware multi-scale feature fusion for metagenomic sequence classification

Yan Qian, Quanjie Song, Xinyi Xie, Li Deng

published 05 Oct 2026

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Proteomic machine-learning signatures associated with carotid plaque: A population-based hypothesis-generating study

Anna Szpakowicz, Wojciech Lesiński, Jakub K. Tuchliński, Urszula Roszkowska, Marlena Dubatówka, Zofia Stachurska, Marcin Kondraciuk, Witold R. Rudnicki, Karol A. Kamiński

published 24 Sep 2026

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Proteomic and lipidomic characterization of Hemipyrellia ligurriens larval extracts using LC-MS/MS and GC-MS: Identification of putative antimicrobial molecules and preliminary functional assessment

Pluemkamon Phuwanatsarunya, Sophit Khanthawong, Worasak Kaewkong, Tongjit Thanchomnang, Chaturong Inpad, Sudarat Onsurathum, Rapee Thummeepak, Ketsarin Thipphet, Kabkaew L. Sukontason, Tomomitsu Satho, Nophawan Bunchu

published 22 Sep 2026

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Integrated analysis of transcriptomic and proteomic profiles identifies divergent regulatory networks for intramuscular fat in Chinese versus Western Pigs

Caoyan Xu, Pengcheng Shen, Chang Sheng Jiang, Ahmed H. Ghonaim, Man Ren, Xiaojin Li, Qianqian Hu, Chonglong Wang

published 18 Sep 2026

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Computational screening of oncogenic genetic variations in tumor suppressor proteins driving gastric cancer pathogenesis

Faria Ferdouse Mim, Taslima Akter Sumiya, Roksana Khanam, Jannati Akter, Farhana Arzu, Samia Haque, Md. Roman Miah, K.M. Tanjida Islam, Shahin Mahmud

published 17 Sep 2026

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GenBank mining reveals novel insights into Rhizobium phylogeny: Identical 16S rRNA sequences are mainly uncoupled from species designation, host plant, and geographic origin: How this search suggested the definition of a direct ‘microbial h-index’

Rosella Muresu, Monica Rodriguez, Andrea Squartini

published 11 Sep 2026

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Whole exome sequencing and cluster analysis reveal that EPB41L4A mutation may trigger tooth agenesis

Tian-Qi Li, Qin Zhang, Hui-Juan Wang, Zhao-Feng Ma, Bing-Yu Lu, Ke-Gui Hou, Xiang-Yu Zhang

published 09 Sep 2026

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Correlation assessment of SARS-CoV-2 variants and their subvariants present in clinical and wastewater samples in Oregon, USA (February 7, 2021 - February 26, 2022) using the Freyja bioinformatics approach

Anirudh Bhatia, Justin Elser, Steven J. Carrell, Brent Kronmiller, Melissa Sutton, Christine Kelly, Tyler S. Radniecki

published 09 Sep 2026

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Acute Myeloid Leukemia(AML) proteins for in silico drug design using pharmacophore modeling, molecular docking and molecular dynamics simulation

Partho Bosu, Tonmoy Adhikary, Abu Sayed Rafi, Naveed Iqbal, Fatima Rasool, Payer Ahmed

published 02 Sep 2026

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