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Biological databases

Comparative Analysis of Pyrosequencing and a Phylogenetic Microarray for Exploring Microbial Community Structures in the Human Distal Intestine

Marcus J. Claesson, Orla O'Sullivan, [ ... ], Paul W. O'Toole

Coupling between Properties of the Protein Shape and the Rate of Protein Folding

Dmitry N. Ivankov, Natalya S. Bogatyreva, Michail Yu Lobanov, Oxana V. Galzitskaya

Mining Biological Pathways Using WikiPathways Web Services

Thomas Kelder, Alexander R. Pico, [ ... ], Bruce R. Conklin

A Method for Studying Protistan Diversity Using Massively Parallel Sequencing of V9 Hypervariable Regions of Small-Subunit Ribosomal RNA Genes

Linda A. Amaral-Zettler, Elizabeth A. McCliment, Hugh W. Ducklow, Susan M. Huse

Evaluation of Three Automated Genome Annotations for Halorhabdus utahensis

Peter Bakke, Nick Carney, [ ... ], A. Malcolm Campbell

Physical Properties of Intact Proteins May Predict Allergenicity or Lack Thereof

Suchita Singh, Bhupesh Taneja, Sundeep Santosh Salvi, Anurag Agrawal

A Novel Human Tectonin Protein with Multivalent β-Propeller Folds Interacts with Ficolin and Binds Bacterial LPS

Diana Hooi Ping Low, Zhiwei Ang, [ ... ], Jeak Ling Ding

PSPP: A Protein Structure Prediction Pipeline for Computing Clusters

Michael S. Lee, Rajkumar Bondugula, [ ... ], Jaques Reifman

Genomes2Drugs: Identifies Target Proteins and Lead Drugs from Proteome Data

David Toomey, Heinrich C. Hoppe, [ ... ], Anthony J. Chubb

A Sequence and Structure Based Method to Predict Putative Substrates, Functions and Regulatory Networks of Endo Proteases

Prasanna Venkatraman, Satish Balakrishnan, [ ... ], Suyog Pol

How Large Is the Metabolome? A Critical Analysis of Data Exchange Practices in Chemistry

Tobias Kind, Martin Scholz, Oliver Fiehn

smyRNA: A Novel Ab Initio ncRNA Gene Finder

Raheleh Salari, Cagri Aksay, [ ... ], S. Cenk Sahinalp

An Estimate of the Numbers and Density of Low-Energy Structures (or Decoys) in the Conformational Landscape of Proteins

Kanagasabai Vadivel, Gautham Namasivayam

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