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Bacterial genomics

OpDetect: A convolutional and recurrent neural network classifier for precise and sensitive operon detection from RNA-seq data

Rezvan Karaji, Lourdes Peña-Castillo

Whole genome-based reclassification of several species of the genus Nonomuraea

Noureddine Bouras, Imen Nouioui, [ ... ], Sherif S. Ebada

Comparative genomics of Lentilactobacillus buchneri reveals strain-level hyperdiversity and broad-spectrum CRISPR immunity against human and livestock gut phages

Ismail Gumustop, Ibrahim Genel, Ibrahim Cagri Kurt, Fatih Ortakci

A new nodule-associated bacterium, Cupriavidus consociatus sp. nov. Isolated from the root nodules of Leucaena sp. and Arachis sp. growing in a cacao field in Chiapas, Mexico

Erika-Yanet Tapia-García, Belén Chávez-Ramírez, [ ... ], Paulina Estrada-de los Santos

Comparative genomic analysis of Streptococcus suis sequence type 105 and development of a PCR diagnostic tool

Parichart Boueroy, Peechanika Chopjitt, [ ... ], Anusak Kerdsin

Genomic insights into the taxonomic status and bioactive gene cluster profiling of Bacillus velezensis RVMD2 isolated from desert rock varnish in Ma’an, Jordan

Sulaiman M. Alnaimat, Saqr Abushattal, [ ... ], Khang Wen Goh

Isolation of a potentially arsenic-resistant Halomonas elongata strain (ml10562) from hypersaline systems in the Peruvian Andes, Cusco

Shirly Pila-Lacuta, David Pauccar, [ ... ], María Antonieta Quispe-Ricalde

An insight into the genome-wide analysis of bacterial defense mechanisms in a uropathogenic Morganella morganii isolate from Bangladesh

Syed Muktadir Al Sium, Barna Goswami, [ ... ], Md. Salim Khan

Genomic insights into the probiotic potential and genes linked to gallic acid metabolism in Pediococcus pentosaceus MBBL6 isolated from healthy cow milk

Md. Morshedur Rahman, Naim Siddique, [ ... ], M. Nazmul Hoque

Prediction of antimicrobial resistance of Klebsiella pneumoniae from genomic data through machine learning

Chiara Condorelli, Emanuele Nicitra, [ ... ], Mattia Frasca

Whole genome-based reclassification of several species of the genus Microbispora

Noureddine Bouras, Ricardo A. R. Machado

A comparative genomic study of a hydrocarbon-degrading marine bacterial consortium

Jorge Rojas-Vargas, Eria A. Rebollar, Alejandro Sanchez-Flores, Liliana Pardo-López

Pangenome and genomic signatures linked to the dominance of the lineage-4 of Mycobacterium tuberculosis isolated from extrapulmonary tuberculosis patients in western Ethiopia

Basha Chekesa, Harinder Singh, [ ... ], Gobena Ameni

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