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Gene expression

Transcriptome and network analysis pinpoint ABA and plastid ribosomal proteins as main contributors to salinity tolerance in the rice variety, CSR28

Mojdeh Akbarzadeh Lelekami, Mohammad Hadi Pahlevani, Khalil Zaynali Nezhad, Keyvan Mahdavi Mashaki

published 17 Apr 2025

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Clinical feature and gene expression analysis in low prostate-specific antigen, high-grade prostate cancer

Peng Zhang, Tieding Chen, Ming Yang

published 15 Apr 2025

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Repression of ctrA and chpT by a transcriptional regulator of the Xre family that is expressed by RpoN3 and its cognate activator protein in Cereibacter sphaeroides

Benjamín Vega-Baray, José Hernández-Valle, Sebastián Poggio, Laura Camarena

published 15 Apr 2025

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Extra virgin olive oil mitigates lung injury in necrotizing enterocolitis: Effects on TGFβ1, Caspase-3, and MDA in a neonatal rat model

Mustafa Tuşat, Recep Eröz, Ferhan Bölükbaş, Erkan Özkan, Mehmet Semih Demirtaş, Hüseyin Erdal, Osman Okan Özocak

published 15 Apr 2025

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Mapping the temporal transcriptomic signature of a viral pathogen through CAGE and nanopore sequencing

Dóra Tombácz, Balázs Kakuk, Gábor Torma, Ádám Fülöp, Ákos Dörmő, Gábor Gulyás, Zsolt Csabai, Zsolt Boldogkői

published 15 Apr 2025

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Bioinformatics analysis and development of functional markers for TaMYB4-1A in wheat

Dan Zhao, Yuru Ma, Yufeng Yang, Zhaoyang Li, Chaoran Wang, Yuhan Fu, Yang Chen, Tengteng Zhang, Yi Ding, Huiqiang Wang, Xuehui Zhang, Hao Zhang

published 15 Apr 2025

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c-Triadem: A constrained, explainable deep learning model to identify novel biomarkers in Alzheimer’s disease

Sherlyn Jemimah, Ferial Abuhantash, Aamna AlShehhi

published 14 Apr 2025

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Comparative transcriptome analysis of Labeo calbasu (Hamilton, 1822) from polluted and non-polluted rivers in India

Smruti Priyambada Pradhan, Hirak Jyoti Chakraborty, Ayushman Gadnayak, Subhashree Subhasmita Raut, Dhruba Jyoti Sarkar, Anu Sharma, Dwijesh Chandra Mishra, Mohammad Samir Farooqi, Bijaya Kumar Behera, Basanta Kumar Das, for the Centre for Agricultural Bioinformatics (CABin) Scheme, ICAR-IASRI, New Delhi

published 10 Apr 2025

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A framework for visualizing and describing city image promotion short video data based on microcube model

Jing He, Zhuoluo Yang, Jiayi Zhu

published 10 Apr 2025

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Reconstruction of the lncRNA-miRNA-mRNA network based on competitive endogenous RNA reveals functional miRNAs and lncRNAs in burns and keloids

Yueru Wang, Zhichao Wang, Jiaojiao Pan, He Wang, Ziwen Lei, Jing Liu, Junbo Zou, Haizhen Lv, Fei Luan

published 09 Apr 2025

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Utilizing a deep learning model based on BERT for identifying enhancers and their strength

Tong Wang, Mengqi Gao

published 09 Apr 2025

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Trillin protects against doxorubicin-induced cardiotoxicity through regulating Nrf2/HO-1 signaling pathway

Xinyi Yang, Sili Liu, Miyan Liu, Didong Lou, Wenjun Zou, Xiaofen Li

published 08 Apr 2025

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Ptgds downregulation protect vestibular hair cells from aminoglycoside-induced vestibulotoxicity

Chen Chen, Zhimin Zhao, Jinghong Han, Yue Zhang, Guohui Nie

published 08 Apr 2025

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