Peer Review History

Original SubmissionAugust 10, 2021
Decision Letter - Richard Turner, Editor

Dear Dr Murhekar,

Thank you for submitting your manuscript entitled "Prevalence of IgG antibodies against SARS-CoV-2 among the general population and healthcare workers in India, June–July 2021" for consideration by PLOS Medicine.

Your manuscript has now been evaluated by the PLOS Medicine editorial staff and I am writing to let you know that we would like to send your submission out for external assessment.

However, we first need you to complete your submission by providing the metadata that is required for full assessment. To this end, please login to Editorial Manager where you will find the paper in the 'Submissions Needing Revisions' folder on your homepage. Please click 'Revise Submission' from the Action Links and complete all additional questions in the submission questionnaire.

Please re-submit your manuscript within two working days, i.e. by Aug 13 2021 11:59PM.

Login to Editorial Manager here: https://www.editorialmanager.com/pmedicine

Once your full submission is complete, your paper will undergo a series of checks in preparation for assessment.

Feel free to email us at plosmedicine@plos.org if you have any queries relating to your submission.

Kind regards,

Richard Turner, PhD

Senior Editor, PLOS Medicine

rturner@plos.org

Revision 1
Decision Letter - Richard Turner, Editor

Dear Dr. Murhekar,

Thank you very much for submitting your manuscript "Prevalence of IgG antibodies against SARS-CoV-2 among the general population and healthcare workers in India, June–July 2021" (PMEDICINE-D-21-03454R1) for consideration at PLOS Medicine.

Your paper was discussed with an academic editor with relevant expertise and sent to independent reviewers, including a statistical reviewer. The reviews are appended at the bottom of this email and any accompanying reviewer attachments can be seen via the link below:

[LINK]

In light of these reviews, we will not be able to accept the manuscript for publication in the journal in its current form, but we would like to invite you to submit a revised version that addresses the reviewers' and editors' comments fully. You will appreciate that we cannot make a decision about publication until we have seen the revised manuscript and your response, and we expect to seek re-review by one or more of the reviewers.

In revising the manuscript for further consideration, your revisions should address the specific points made by each reviewer and the editors. Please also check the guidelines for revised papers at http://journals.plos.org/plosmedicine/s/revising-your-manuscript for any that apply to your paper. In your rebuttal letter you should indicate your response to the reviewers' and editors' comments, the changes you have made in the manuscript, and include either an excerpt of the revised text or the location (eg: page and line number) where each change can be found. Please submit a clean version of the paper as the main article file; a version with changes marked should be uploaded as a marked up manuscript.

In addition, we request that you upload any figures associated with your paper as individual TIF or EPS files with 300dpi resolution at resubmission; please read our figure guidelines for more information on our requirements: http://journals.plos.org/plosmedicine/s/figures. While revising your submission, please upload your figure files to the PACE digital diagnostic tool, https://pacev2.apexcovantage.com/. PACE helps ensure that figures meet PLOS requirements. To use PACE, you must first register as a user. Then, login and navigate to the UPLOAD tab, where you will find detailed instructions on how to use the tool. If you encounter any issues or have any questions when using PACE, please email us at PLOSMedicine@plos.org.

We hope to receive your revised manuscript by Oct 28 2021 11:59PM. Please email us (plosmedicine@plos.org) if you have any questions or concerns.

***Please note while forming your response, if your article is accepted, you may have the opportunity to make the peer review history publicly available. The record will include editor decision letters (with reviews) and your responses to reviewer comments. If eligible, we will contact you to opt in or out.***

We ask every co-author listed on the manuscript to fill in a contributing author statement, making sure to declare all competing interests. If any of the co-authors have not filled in the statement, we will remind them to do so when the paper is revised. If all statements are not completed in a timely fashion this could hold up the re-review process. If new competing interests are declared later in the revision process, this may also hold up the submission. Should there be a problem getting one of your co-authors to fill in a statement we will be in contact. YOU MUST NOT ADD OR REMOVE AUTHORS UNLESS YOU HAVE ALERTED THE EDITOR HANDLING THE MANUSCRIPT TO THE CHANGE AND THEY SPECIFICALLY HAVE AGREED TO IT. You can see our competing interests policy here: http://journals.plos.org/plosmedicine/s/competing-interests.

Please use the following link to submit the revised manuscript:

https://www.editorialmanager.com/pmedicine/

Your article can be found in the "Submissions Needing Revision" folder.

To enhance the reproducibility of your results, we recommend that you deposit your laboratory protocols in protocols.io, where a protocol can be assigned its own identifier (DOI) such that it can be cited independently in the future. Additionally, PLOS ONE offers an option to publish peer-reviewed clinical study protocols. Read more information on sharing protocols at https://plos.org/protocols?utm_medium=editorial-email&utm_source=authorletters&utm_campaign=protocols

Please ensure that the paper adheres to the PLOS Data Availability Policy (see http://journals.plos.org/plosmedicine/s/data-availability), which requires that all data underlying the study's findings be provided in a repository or as Supporting Information. For data residing with a third party, authors are required to provide instructions with contact information for obtaining the data. PLOS journals do not allow statements supported by "data not shown" or "unpublished results." For such statements, authors must provide supporting data or cite public sources that include it.

Please let me know if you have any questions, and we look forward to receiving your revised manuscript.

Sincerely,

Richard Turner PhD

Senior editor, PLOS Medicine

rturner@plos.org

-----------------------------------------------------------

Requests from the editors:

We ask you to limit the number of authors to fewer than 30, with the additional contributors forming an author group.

Noting PLOS' data policy (https://journals.plos.org/plosmedicine/s/data-availability), please confirm that de-identified study data will be made available, and supply a non-author contact for those interested in inquiring about data access.

Please adapt the title to include a study descriptor following a colon, e.g., "... June-July, 2021: A population-based cohort study".

In the abstract and throughout the paper, please quote p values alongside 95% CI, where available.

Please trim the "Conclusions" subsection of your abstract to around half the current length.

After the abstract, please add a new and accessible "Author summary" in non-identical prose. You may find it helpful to consult one or two recent research papers published in PLOS Medicine to get a sense of the preferred style.

In the methods section, please state whether the study had a protocol or prespecified analysis plan, and if so attach the document as a supplementary file, referred to in the text.

Please highlight analyses that were not prespecified.

Throughout the text, please adapt reference call-outs to the following style: "... cases reported globally [1].".

Please remove the information on competing interests and data sharing from the end of the main text. In the event of publication this will appear in the article metadata, via entries in the submission form.

Please move the list of contributors at the end of the ms to a supplementary file.

In the reference list, please convert italics and boldface text into plain text.

Where appropriate, 6 author names should be listed, followed by "et al.".

Please add a completed checklist for the most appropriate reporting guideline, e.g., STROBE, as an attachment, labelled "S1_STROBE_Checklist" or similar and referred to as such in your Methods section.

In the checklist, please refer to individual items by section, e.g., "Methods", and paragraph numbers, not by line or page numbers as these generally change in the event of publication.

Comments from the reviewers:

*** Reviewer #1:

This work is one of the extensive work done during the time of covid-19 and particularly from countries where drastic infection has occurred.

Very limited layout or format comments.

1- I like the title of "Seroprevalance" in this case than "prevalence", as testing was used to detect the antibodies rather than other type of testing.

2- abstract: the paragraph related to the limitations, could be reflected clearly under subheadings in the discussion, as it was done. no need to be in the abstract.

3- abstract, in the conclusion: the second line, "by June 2020". I think it should be stated as "June 2021".

4- abstract: The conclusion is so long and should be reduced to the main points. No matter to be little wider in the text.

5- Result, page 7: The paragraph started with "the weighted prevalence of IgG antibodies ...........(table 2)", probably should be stated when the description of table 2 is done.

6- References, page 11: Format and layout of the references is required according to the Journal instructions.

7- I recommend to use the table related to the Health care workers to be among the main tables in the text and not among the supplementary.

*** Reviewer #2:

Abstract: in conclusion there is typo error ".... by June 2020"

Methods: sample size calculation with design effect should be provided for the general population and also for the HCWs.

*** Reviewer #3:

[supportive report received]

*** Reviewer #4:

Important study showing the power of infection and capacity of transmission this virus in a different population (non-HCW and HCW) living in different regions (rural, non-slum, and -slum areas) of a big country. The authors dedicate strong space to describe the methods used, however, I would like to suggest improving the description of the regression model, including why the authors did not use Poisson Regression model in this cross-sectional study?! On the other hand, I understood the use of weights design mainly because of the probable difference among the size population of the district studied, however, the authors should have provided in the tables (#3, and #4 and #5) the target-population, this is important to share with the readers the probable high variability among the clusters represented of the districts studied.

*** Reviewer #5:

[See attachment]

Michael Dewey

***

Any attachments provided with reviews can be seen via the following link:

[LINK]

Attachments
Attachment
Submitted filename: PMEDICINE-D-21-03454_R1_reviewer.pdf
Attachment
Submitted filename: murhekar.pdf
Revision 2

Attachments
Attachment
Submitted filename: Replies to reviewers comments_MM_18Oct_F.docx
Decision Letter - Richard Turner, Editor

Dear Dr. Murhekar,

Thank you very much for re-submitting your manuscript "Seroprevalence of IgG antibodies against SARS-CoV-2 among the general population and healthcare workers in India, June–July 2021: A population-based cross-sectional study" (PMEDICINE-D-21-03454R2) for consideration at PLOS Medicine.

I have discussed the paper with our academic editor and it was also seen again by two reviewers. I am pleased to tell you that, provided the remaining editorial and production issues are fully dealt with, we expect to be able to accept the paper for publication in the journal.

The remaining issues that need to be addressed are listed at the end of this email. Any accompanying reviewer attachments can be seen via the link below. Please take these into account before resubmitting your manuscript:

[LINK]

***Please note while forming your response, if your article is accepted, you may have the opportunity to make the peer review history publicly available. The record will include editor decision letters (with reviews) and your responses to reviewer comments. If eligible, we will contact you to opt in or out.***

In revising the manuscript for further consideration here, please ensure you address the specific points made by each reviewer and the editors. In your rebuttal letter you should indicate your response to the reviewers' and editors' comments and the changes you have made in the manuscript. Please submit a clean version of the paper as the main article file. A version with changes marked must also be uploaded as a marked up manuscript file.

Please also check the guidelines for revised papers at http://journals.plos.org/plosmedicine/s/revising-your-manuscript for any that apply to your paper. If you haven't already, we ask that you provide a short, non-technical Author Summary of your research to make findings accessible to a wide audience that includes both scientists and non-scientists. The Author Summary should immediately follow the Abstract in your revised manuscript. This text is subject to editorial change and should be distinct from the scientific abstract.

We hope to receive your revised manuscript within 1 week. Please email us (plosmedicine@plos.org) if you have any questions or concerns.

We ask every co-author listed on the manuscript to fill in a contributing author statement. If any of the co-authors have not filled in the statement, we will remind them to do so when the paper is revised. If all statements are not completed in a timely fashion this could hold up the re-review process. Should there be a problem getting one of your co-authors to fill in a statement we will be in contact. YOU MUST NOT ADD OR REMOVE AUTHORS UNLESS YOU HAVE ALERTED THE EDITOR HANDLING THE MANUSCRIPT TO THE CHANGE AND THEY SPECIFICALLY HAVE AGREED TO IT.

Please ensure that the paper adheres to the PLOS Data Availability Policy (see http://journals.plos.org/plosmedicine/s/data-availability), which requires that all data underlying the study's findings be provided in a repository or as Supporting Information. For data residing with a third party, authors are required to provide instructions with contact information for obtaining the data. PLOS journals do not allow statements supported by "data not shown" or "unpublished results." For such statements, authors must provide supporting data or cite public sources that include it.

To enhance the reproducibility of your results, we recommend that you deposit your laboratory protocols in protocols.io, where a protocol can be assigned its own identifier (DOI) such that it can be cited independently in the future. Additionally, PLOS ONE offers an option to publish peer-reviewed clinical study protocols. Read more information on sharing protocols at https://plos.org/protocols?utm_medium=editorial-email&utm_source=authorletters&utm_campaign=protocols

Please review your reference list to ensure that it is complete and correct. If you have cited papers that have been retracted, please include the rationale for doing so in the manuscript text, or remove these references and replace them with relevant current references. Any changes to the reference list should be mentioned in the rebuttal letter that accompanies your revised manuscript.

Please note, when your manuscript is accepted, an uncorrected proof of your manuscript will be published online ahead of the final version, unless you've already opted out via the online submission form. If, for any reason, you do not want an earlier version of your manuscript published online or are unsure if you have already indicated as such, please let the journal staff know immediately at plosmedicine@plos.org.

Please let me know if you have any questions, and we look forward to receiving the revised manuscript.   

Sincerely,

Richard Turner, PhD

Senior Editor, PLOS Medicine

rturner@plos.org

------------------------------------------------------------

Requests from Editors:

Please adapt the data sharing statement (submission form) to read "... Given the nature of the data, potential users will be asked to sign a data-sharing agreement".

As mentioned previously, please include no more than 30 authors, with the remaining individuals participating as a named author group, with group members listed in the Acknowledgements.

We ask you to add an additional sentence, say, to the abstract to quote additional information on the cohort studied (quoting the number of participants and some information on age, sex and residence).

Please make that "test-adjusted" in the abstract, and throughout the text where the phrase is used as an adjective.

Please revisit the "Author summary" section, aiming for no more than 3-4 points in each of the three subsections. For example, the final point of the first subsection ("We conducted the fourth ...") should either be deleted or moved to the second subsection.

At the end of the Introduction (main text), please make that "We conducted the fourth round of a national ...".

Under editorial query "8" you mention non-prespecified sensitivity analyses. Please add a few words to the methods and/or results sections of the paper, if not already present, to highlight these non-prespecified analyses.

In the second paragraph of the Discussion section (main text) there is a superscript "2". Please reformat this if it is a reference call-out.

Noting reviewer 5's comment, we ask you to add "we believe" or similar when you are making recommendations not directly based on the findings of your study.

Please spell out the institutional author name for reference 10.

Noting references 15 & 16, please add "[preprint]" to all preprints cited, unless you are able to substitute the corresponding peer-reviewed papers.

Comments from Reviewers:

*** Reviewer #4:

I believe is very important to discuss in the limitation section the option related to use in the analysis a mixed-models GLM with overdispersion of the data, mainly when it's applied in cross sectional study.

*** Reviewer #5:

The authors have addressed my points. We still disagree about the wisdom of including recommendations (genomic scanning and mask wearing) in the conclusion which are not supported by the authors' research however sensible they may be. I think this is perhaps more of an editorial policy issue so I leave it to the team to decide.

Michael Dewey

***

Any attachments provided with reviews can be seen via the following link:

[LINK]

Revision 3

Attachments
Attachment
Submitted filename: PMEDICINE_Reply to Reviewers comments_Final_TJ.docx
Decision Letter - Richard Turner, Editor

Dear Dr Murhekar, 

On behalf of my colleagues and the Academic Editor, Dr Suthar, I am pleased to inform you that we have agreed to publish your manuscript "Seroprevalence of IgG antibodies against SARS-CoV-2 among the general population and healthcare workers in India, June–July 2021: A population-based cross-sectional study" (PMEDICINE-D-21-03454R3) in PLOS Medicine.

Before your manuscript can be formally accepted you will need to complete some formatting changes, which you will receive in a follow up email. Please be aware that it may take several days for you to receive this email; during this time no action is required by you. Once you have received these formatting requests, please note that your manuscript will not be scheduled for publication until you have made the required changes.

Prior to final acceptance, please:

- Regarding the following sentence in the author summary: "Considering high seroprevalence of SARS-CoV-2, the future surge of cases in India is expected to be lower than the second wave.", please amend the sentence to "The substantial seroprevalence of anti-SARS-CoV-2 antibodies in the Indian population should provide a measure of protection against future waves of COVID-19 in the country.", or similar;

- Reverse the order of the two points in the "What do these findings mean?" in the author summary; and

- Move "[preprint]" from the Discussion section to the appropriate entry in the reference list (reference 16).

In the meantime, please log into Editorial Manager at http://www.editorialmanager.com/pmedicine/, click the "Update My Information" link at the top of the page, and update your user information to ensure an efficient production process. 

PRESS

We frequently collaborate with press offices. If your institution or institutions have a press office, please notify them about your upcoming paper at this point, to enable them to help maximise its impact. If the press office is planning to promote your findings, we would be grateful if they could coordinate with medicinepress@plos.org. If you have not yet opted out of the early version process, we ask that you notify us immediately of any press plans so that we may do so on your behalf.

We also ask that you take this opportunity to read our Embargo Policy regarding the discussion, promotion and media coverage of work that is yet to be published by PLOS. As your manuscript is not yet published, it is bound by the conditions of our Embargo Policy. Please be aware that this policy is in place both to ensure that any press coverage of your article is fully substantiated and to provide a direct link between such coverage and the published work. For full details of our Embargo Policy, please visit http://www.plos.org/about/media-inquiries/embargo-policy/.

To enhance the reproducibility of your results, we recommend that you deposit your laboratory protocols in protocols.io, where a protocol can be assigned its own identifier (DOI) such that it can be cited independently in the future. Additionally, PLOS ONE offers an option to publish peer-reviewed clinical study protocols. Read more information on sharing protocols at https://plos.org/protocols?utm_medium=editorial-email&utm_source=authorletters&utm_campaign=protocols

Thank you again for submitting to PLOS Medicine. We look forward to publishing your paper. 

Sincerely, 

Richard Turner, PhD 

Senior Editor, PLOS Medicine

rturner@plos.org

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