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Correction: Constructing Benchmark Test Sets for Biological Sequence Analysis Using Independent Set Algorithms

  • Samantha Petti,
  • Sean R Eddy

The description of Algorithm 2 at the bottom of page 4 is incorrect. The corrected pseudocode reads like:

If r < 1/2 then

    if v is not adjacent to any vertex in T, add v to S

    else if v is not adjacent to any vertex in S, add v to T

else

    if v is not adjacent to any vertex in S, add v to T

    else if v is not adjacent to any vertex in T, add v to S

Reference

  1. 1. Petti S, Eddy SR (2022) Constructing benchmark test sets for biological sequence analysis using independent set algorithms. PLoS Comput Biol 18(3): e1009492. https://doi.org/10.1371/journal.pcbi.1009492 pmid:35255082