Peer Review History
| Original SubmissionOctober 3, 2025 |
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PCOMPBIOL-D-25-02008 Directional and disruptive selection in populations structured by class and continuous ontogeny under incomplete plasticity PLOS Computational Biology Dear Dr. Weyna, Thank you for submitting your manuscript to PLOS Computational Biology. After careful consideration, we feel that it has merit but does not fully meet PLOS Computational Biology's publication criteria as it currently stands. Therefore, we invite you to submit a revised version of the manuscript that addresses the points raised during the review process. Please submit your revised manuscript by Jan 28 2026 11:59PM. If you will need more time than this to complete your revisions, please reply to this message or contact the journal office at ploscompbiol@plos.org. When you're ready to submit your revision, log on to https://www.editorialmanager.com/pcompbiol/ and select the 'Submissions Needing Revision' folder to locate your manuscript file. Please include the following items when submitting your revised manuscript: * A rebuttal letter that responds to each point raised by the editor and reviewer(s). You should upload this letter as a separate file labeled 'Response to Reviewers'. This file does not need to include responses to formatting updates and technical items listed in the 'Journal Requirements' section below. * A marked-up copy of your manuscript that highlights changes made to the original version. You should upload this as a separate file labeled 'Revised Manuscript with Track Changes'. * An unmarked version of your revised paper without tracked changes. You should upload this as a separate file labeled 'Manuscript'. If you would like to make changes to your financial disclosure, competing interests statement, or data availability statement, please make these updates within the submission form at the time of resubmission. Guidelines for resubmitting your figure files are available below the reviewer comments at the end of this letter. We look forward to receiving your revised manuscript. Kind regards, Christian Hilbe Academic Editor PLOS Computational Biology Natalia Komarova Section Editor PLOS Computational Biology Additional Editor Comments: Thank you for your submission. The paper is perhaps more on the technical end of the spectrum of papers typically sent to PLoS Computational Biology, but both reviewers very much appreciate the contribution. Please take into account their very constructive comments on how to further improve the paper. Journal Requirements: We ask that a manuscript source file is provided at Revision. Please upload your manuscript file as a .doc, .docx, .rtf or .tex. If you are providing a .tex file, please upload it under the item type u2018LaTeX Source Fileu2019 and leave your .pdf version as the item type u2018Manuscriptu2019. Reviewers' comments: Reviewer's Responses to Questions Comments to the Authors: Please note here if the review is uploaded as an attachment. Reviewer #1: This study presents conditions for convergence stability and evolutionary branching in the context of trait systems in age- and class-structured populations, generalising previous theory. This seems like a solid contribution that is a necessary part of extending the basic theory of adaptive dynamics to more complex biological scenarios. The framework makes sense to me conceptually, but I am not qualified to check all of the mathematical details. My review is consequently restricted to more superficial aspects of the manuscript. Some general comments: 1. It was not always clear to me what restrictive assumptions are being made. For example, the set-up seems to exclude environmental effects (including indirect genetic effects) on the phenotype. It also seems to assume that development is deterministic. Some further guidance to the reader would help here. 2. More could be done to highlight the new insights from the example at the end, especially in the abstract. 3. Can evolutionary branching ever lead to the maintenance of more than two alleles in the example? Naively I would think that if selection for assortative mating is very strong, males should split up into even more morphs. 4. There is a substantial literature on size-assortative mating in various species of mollusc. Perhaps the authors could link their example to this literature. More specific comments: L44-60: Another point is that if plastic traits are governed by a large number of loci, each of which is only expressed in particular circumstances, then selection on each locus might be very weak. L61, 88: ‘traits’ L116: It might be helpful to specify that n_x is independent of age. Eq. 1: The survival probability function used in this equation is not introduced until two paragraphs later. Some signposting or rearrangement would be helpful. Table 2: The notation v* for the singular strategy hasn’t been introduced yet. Maybe it could be added to the table legend. L222: Does this actually correspond to any mathematical definition of curvature? I know that similar claims are made frequently in the theoretical literature on quadratic selection and certainly the second derivative is related to curvature. But most definitions of curvature have normalisation terms that depend on the first derivative and I see no guarantee that such terms will be negligible here. L236-7: I don’t understand why mutation can’t move traits along a boundary. L240: Mutational effects being exactly equal across traits is only one possible type of constraint on the mutational effects distribution, but it seems as if you treat this as the only form of such a constraint. See also L277 and L563 onwards. Box 1: The co-states have no yet been defined. Please signpost. P15, P26: The equation numbering does not continue correctly after the two boxes. L630: Please specify that it is the per-male rate of egg production. Fig. 3: This figure is quite hard to read, requiring switching back and forth between the legend and the figure. For example, finding the full set of parameter values for each panel requires reading both the top and side labels in the figure and the remaining parameters in the legend. Some redundancy and better signposting would be very helpful here. Eq. 21: Please remove the comma at the end of the equation (grammatically the equation functions as the subject of the following sentence – the comma suggests instead that the equation functions as a sentence in its own right). L707-8: Missing close parenthesis. Reviewer #2: the review is uploaded as an attachment ********** Have the authors made all data and (if applicable) computational code underlying the findings in their manuscript fully available? The PLOS Data policy requires authors to make all data and code underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data and code should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data or code —e.g. participant privacy or use of data from a third party—those must be specified.requires authors to make all data and code underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data and code should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data or code —e.g. participant privacy or use of data from a third party—those must be specified. Reviewer #1: Yes Reviewer #2: Yes ********** PLOS authors have the option to publish the peer review history of their article (what does this mean? ). If published, this will include your full peer review and any attached files.). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? 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| Revision 1 |
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Dear Dr. Weyna, We are pleased to inform you that your manuscript 'Directional and disruptive selection in populations structured by class and continuous ontogeny under incomplete plasticity' has been provisionally accepted for publication in PLOS Computational Biology. Before your manuscript can be formally accepted you will need to complete some formatting changes, which you will receive in a follow up email. A member of our team will be in touch with a set of requests. Please note that your manuscript will not be scheduled for publication until you have made the required changes, so a swift response is appreciated. IMPORTANT: The editorial review process is now complete. PLOS will only permit corrections to spelling, formatting or significant scientific errors from this point onwards. Requests for major changes, or any which affect the scientific understanding of your work, will cause delays to the publication date of your manuscript. Should you, your institution's press office or the journal office choose to press release your paper, you will automatically be opted out of early publication. We ask that you notify us now if you or your institution is planning to press release the article. All press must be co-ordinated with PLOS. Thank you again for supporting Open Access publishing; we are looking forward to publishing your work in PLOS Computational Biology. Best regards, Christian Hilbe Academic Editor PLOS Computational Biology Natalia Komarova Section Editor PLOS Computational Biology *********************************************************** Already the first time around, the two reviewers were very positive and suggested 'Accept' and 'Minor revisions', respectively. The authors have carefully revised the manuscript, and they have addressed all remaining comments. The paper is now suitable for publication in PLoS Computational Biology. |
| Formally Accepted |
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PCOMPBIOL-D-25-02008R1 Directional and disruptive selection in populations structured by class and continuous ontogeny under incomplete plasticity Dear Dr Weyna, I am pleased to inform you that your manuscript has been formally accepted for publication in PLOS Computational Biology. Your manuscript is now with our production department and you will be notified of the publication date in due course. The corresponding author will soon be receiving a typeset proof for review, to ensure errors have not been introduced during production. Please review the PDF proof of your manuscript carefully, as this is the last chance to correct any errors. Please note that major changes, or those which affect the scientific understanding of the work, will likely cause delays to the publication date of your manuscript. Soon after your final files are uploaded, unless you have opted out, the early version of your manuscript will be published online. The date of the early version will be your article's publication date. The final article will be published to the same URL, and all versions of the paper will be accessible to readers. For Research, Software, and Methods articles, you will receive an invoice from PLOS for your publication fee after your manuscript has reached the completed accept phase. If you receive an email requesting payment before acceptance or for any other service, this may be a phishing scheme. Learn how to identify phishing emails and protect your accounts at https://explore.plos.org/phishing. Thank you again for supporting PLOS Computational Biology and open-access publishing. We are looking forward to publishing your work! With kind regards, Zsofia Freund PLOS Computational Biology | Carlyle House, Carlyle Road, Cambridge CB4 3DN | United Kingdom ploscompbiol@plos.org | Phone +44 (0) 1223-442824 | ploscompbiol.org | @PLOSCompBiol |
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