Peer Review History

Original SubmissionOctober 7, 2020
Decision Letter - Natalia L. Komarova, Editor, Feng Fu, Editor

Dear Prof. Dr. Riedl,

Thank you very much for submitting your manuscript "Avoiding the bullies: Resilience of cooperation among unequals" for consideration at PLOS Computational Biology.

As with all papers reviewed by the journal, your manuscript was reviewed by members of the editorial board and by several independent reviewers. In light of the reviews (below this email), we would like to invite the resubmission of a significantly-revised version that takes into account the reviewers' comments.

Thanks very much for sending your work to PLoS CB. All reviewers like the manuscript and think it a good fit for the journal. Although they cannot recommend it published in present form, they would like to see a revised version where their extensive comments are satisfactorily addressed. We are looking forward to receiving your revised manuscript.

We cannot make any decision about publication until we have seen the revised manuscript and your response to the reviewers' comments. Your revised manuscript is also likely to be sent to reviewers for further evaluation.

When you are ready to resubmit, please upload the following:

[1] A letter containing a detailed list of your responses to the review comments and a description of the changes you have made in the manuscript. Please note while forming your response, if your article is accepted, you may have the opportunity to make the peer review history publicly available. The record will include editor decision letters (with reviews) and your responses to reviewer comments. If eligible, we will contact you to opt in or out.

[2] Two versions of the revised manuscript: one with either highlights or tracked changes denoting where the text has been changed; the other a clean version (uploaded as the manuscript file).

Important additional instructions are given below your reviewer comments.

Please prepare and submit your revised manuscript within 60 days. If you anticipate any delay, please let us know the expected resubmission date by replying to this email. Please note that revised manuscripts received after the 60-day due date may require evaluation and peer review similar to newly submitted manuscripts.

Thank you again for your submission. We hope that our editorial process has been constructive so far, and we welcome your feedback at any time. Please don't hesitate to contact us if you have any questions or comments.

Sincerely,

Feng Fu

Guest Editor

PLOS Computational Biology

Natalia Komarova

Deputy Editor

PLOS Computational Biology

***********************

Thanks very much for sending your work to PLoS CB. All reviewers like the manuscript and think it a good fit for the journal. Although they cannot recommend it published in present form, they would like to see a revised version where their extensive comments are satisfactorily addressed. We are looking forward to receiving your revised manuscript.

Reviewer's Responses to Questions

Comments to the Authors:

Please note here if the review is uploaded as an attachment.

Reviewer #1: Please see attached review.

Reviewer #2: In this paper, the authors aim to study the evolution of cooperation behavior (egalitarian norms/conventions) in the presence of dominant bullies (power asymmetry) using a theoretical framework of evolutionary game theory, in this case, a generalized hawk-dove game of conflict. They find the cooperative conventions can always be maintained if the system allows partner choice, letting individuals change their interaction partners via a simple reinforcement learning process, whereas such conventions would break down if individuals cannot choose their partner freely (such as the random interaction case). Further, they introduce dynamic power asymmetries where individual’s rank depends on the cumulative payoffs and find the emergence of evolutionary cycles of coupled network-strategy-rank changes. The main innovation lies on the incorporation of both power asymmetry and partner choice into games of conflict, and the authors have explicitly demonstrated the nonnegligible power of these two mechanisms in persisting cooperation among unequals.

Overall, I have enjoyed reading this clearly written manuscript, with well-established motivations in an informative introduction and solid results provided by both the main text and the supplementary information. The mathematical derivations are sound and confirmed by sufficient agent-based simulations. The topic is important and attractive. And the model shows a rich set of evolutionary behaviors, some of which are counterintuitive and indeed interesting. In particular, I like the in-depth Discussion that explicitly demonstrates the important insights from the model. I believe this work provides a valuable contribution for the study of cooperation behaviors and will arouse great attention in many fields. Thereby, I am happy to recommend the acceptance of this paper in its current form.

Meanwhile, I would like to provide some minor suggestions that the authors may consider for a further improvement:

(1) The first two sentences in Introduction are exactly the same as in Abstract. It’s better to use a different expression.

(2) The resolution of Fig.1 b is poor in the current version. Also, it’s better to add what the node size represents in the caption of Fig.1 b.

(3) I find the non-monotonous phenomenon in Fig 3 a and b where the highest proportion of pure hawks emerges at intermediate values of f is interesting and I notice that the authors have tried to provide an intuitive explanation (Line 220-221, 225-227). However, I feel that it can be better explained as a combined effect of both avoiding conflicts with ranking individuals and avoiding less benefits from hawk-dove interactions with lower-ranked individuals. The latter is caused by partner choice: lower-ranked individuals would reduce visits to a higher-ranked Hawk host.

(4) some minor mistakes:

Line 18: is dangerous work -- is a dangerous work

Line 76: in that that -- in which

Line 226: at least at least -- at least

Line 615: when does does – when does

Reviewer #3: Foley et. al. investigated whether or not egalitarian conventions survive the presence of dominant individuals that are ensured victory in conflicts. To this end, they focus on the evolutionary dynamics of Hawk-dove game with unequals on dynamical networks. They show that the interaction between social power asymmetry (visit or host) and the partner choice arising from the dynamical nature of the social network, plays a crucial role in giving rise to such egalitarian norms. In addition, they show two other models cannot give rise to such resilience egalitarian convention (with asymmetry and without evolving network, without symmetry and with evolving network). Therefore, it suggests that the interaction between asymmetry and partner choice is key to egalitarian conventions.

The results are sound and this work can have a wide audience in PLOS C. B., since cooperation is an important topic in evolutionary biology. However, the paper is not well-organized and technically I also have some concerns. Therefore, I recommend a major revision.

Comments:

1) Time scales. There are several dynamics: the rank and the network, and the strategy. Previous studies show [66,69] that the time scale of the strategy dynamics and the underlying network would greatly alter the cooperation level. In this work in the method, the authors only adopt one time scale (line 513) for rank dynamics. How Robust is the result with the time scale of different dynamics? A discussion along this line would benefit the audience.

2) Fig 1 is not illustrative enough, I am not clear from the figure how network evolves, and how individuals adjust their behaviors.

3) “Convention” is not defined in a clear way. Typically convention refers to the believing system (e.g. A thinks that B is good if B helps C), here, it seems to refer to a resulting population composition. It should be clearly defined.

4) The interaction between asymmetry and network paves the way (intuitively) to an oscillatory dynamics. (line 385-391), how on earth that this oscillatory dynamics lead to an resilient convention? An intuitive understanding would benefit.

**********

Have all data underlying the figures and results presented in the manuscript been provided?

Large-scale datasets should be made available via a public repository as described in the PLOS Computational Biology data availability policy, and numerical data that underlies graphs or summary statistics should be provided in spreadsheet form as supporting information.

Reviewer #1: Yes

Reviewer #2: None

Reviewer #3: Yes

**********

PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files.

If you choose “no”, your identity will remain anonymous but your review may still be made public.

Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy.

Reviewer #1: No

Reviewer #3: No

Figure Files:

While revising your submission, please upload your figure files to the Preflight Analysis and Conversion Engine (PACE) digital diagnostic tool, https://pacev2.apexcovantage.com. PACE helps ensure that figures meet PLOS requirements. To use PACE, you must first register as a user. Then, login and navigate to the UPLOAD tab, where you will find detailed instructions on how to use the tool. If you encounter any issues or have any questions when using PACE, please email us at figures@plos.org.

Data Requirements:

Please note that, as a condition of publication, PLOS' data policy requires that you make available all data used to draw the conclusions outlined in your manuscript. Data must be deposited in an appropriate repository, included within the body of the manuscript, or uploaded as supporting information. This includes all numerical values that were used to generate graphs, histograms etc.. For an example in PLOS Biology see here: http://www.plosbiology.org/article/info%3Adoi%2F10.1371%2Fjournal.pbio.1001908#s5.

Reproducibility:

To enhance the reproducibility of your results, PLOS recommends that you deposit laboratory protocols in protocols.io, where a protocol can be assigned its own identifier (DOI) such that it can be cited independently in the future. For instructions, please see http://journals.plos.org/compbiol/s/submission-guidelines#loc-materials-and-methods

Attachments
Attachment
Submitted filename: foleyreview.pdf
Attachment
Submitted filename: Review_PLosCB_Xin.pdf
Revision 1

Attachments
Attachment
Submitted filename: 02-RESPONSE.pdf
Decision Letter - Natalia L. Komarova, Editor, Feng Fu, Editor

Dear Prof. Dr. Riedl,

We are pleased to inform you that your manuscript 'Avoiding the bullies: The resilience of cooperation among unequals' has been provisionally accepted for publication in PLOS Computational Biology.

Before your manuscript can be formally accepted you will need to complete some formatting changes, which you will receive in a follow up email. A member of our team will be in touch with a set of requests.

Please note that your manuscript will not be scheduled for publication until you have made the required changes, so a swift response is appreciated.

IMPORTANT: The editorial review process is now complete. PLOS will only permit corrections to spelling, formatting or significant scientific errors from this point onwards. Requests for major changes, or any which affect the scientific understanding of your work, will cause delays to the publication date of your manuscript.

Should you, your institution's press office or the journal office choose to press release your paper, you will automatically be opted out of early publication. We ask that you notify us now if you or your institution is planning to press release the article. All press must be co-ordinated with PLOS.

Thank you again for supporting Open Access publishing; we are looking forward to publishing your work in PLOS Computational Biology. 

Best regards,

Feng Fu

Guest Editor

PLOS Computational Biology

Natalia Komarova

Deputy Editor

PLOS Computational Biology

***********************************************************

I would like to concur with the unanimous recommendation of the three reviewers to accept your excellent contribution to PLoS Computational Biology. As you will see, Reviewer 1 has made some optional comments, which I hope you would be able to take into account when finalizing the accepted version of the manuscript. Also it would be helpful to provide the repository DOI at Harvard Dataverse as said in the cover letter for making simulation codes pulbicly available. Last but not least, the supplementary information is currently appended right after the main text (where SI figures should have been labelled Fig.Sx properly). Thank you for your consideration and congratulations on the nice work!

Reviewer's Responses to Questions

Comments to the Authors:

Please note here if the review is uploaded as an attachment.

Reviewer #1: I would like to thank the authors for all of their effort incorporating suggestions from first round of review. I believe that the manuscript has been much improved, and, in particularly, Figure 1 and the explanation of the model is much clearer in the revised submission. I wholeheartedly support the acceptance of this paper in PLoS Computational Biology. However, i do have a few minor comments that I believe could help for the published version of the paper.

1. I believe that the new simulations in which individuals playing dove against those playing hawk cannot accumulate payoff are helpful for understanding the mechanisms driving the cycling behavior when rankings can change according to payoff. If the authors feel that the mechanism for mimicking negative payoff is too artificial, it may be possible to see similar behavior with non-negative payoffs if the hawk-dove payoff is greater than n-1 times the dove-hawk payoff. In that case, even an individual playing dove against a whole population of hawk-playing visitors would not be able to rise in the rankings. Either way, I think that the behavior in the case in which playing a lot of games and "losing" all of them is worse than playing few games but "winning" is worth mentioning in some form in the supplement.

2. I think it could be useful for the authors to mention that the question of whether to consider static versus dynamical rankings is quite relevant to the literature on the formation of dominance hierarchies. In particular, both "prior attributes" (some underlying strength or skill) or "social winner/loser effects" (dominance rankings depending on past performance) have been posited to explain the structure and formation of social hierarchies. I have included below several references related to mathematical and experimental approaches to this question.

3. In the sentence "Since the payoffs are ≥ 0", I think the word "non-negative" should be used instead of the symbol "≥".

References

Chase, I. D., Tovey, C., Spangler-Martin, D., & Manfredonia, M. (2002). Individual differences versus social dynamics in the formation of animal dominance hierarchies. Proceedings of the National Academy of Sciences, 99(8), 5744-5749.

Dugatkin, L. A. (1997). Winner and loser effects and the structure of dominance hierarchies. Behavioral Ecology, 8(6), 583-587.

Franz, M., McLean, E., Tung, J., Altmann, J., & Alberts, S. C. (2015). Self-organizing dominance hierarchies in a wild primate population. Proceedings of the Royal Society B: Biological Sciences, 282(1814), 20151512.

Laskowski, K. L., Wolf, M., & Bierbach, D. (2016). The making of winners (and losers): how early dominance interactions determine adult social structure in a clonal fish. Proceedings of the Royal Society B: Biological Sciences, 283(1830), 20160183.

Reviewer #2: The authors have addressed all my previous comments, and I am satisfied with their responses. In particular, the logical framework of the entire manuscript looks much better due to the revisions on introduction, Fig. 1 and structural adjustments. And the authors have also made significant efforts to remove repetition and fix usage and grammar, which improves the overall readability.

Therefore I recommend accepting it for publication in PLOS Computational Biology.

Reviewer #3: The authors have replied to all of my concerns, and the manuscript is much clearer than the last submitted version. Thus I recommend the publication of the manuscript in the current form.

**********

Have all data underlying the figures and results presented in the manuscript been provided?

Large-scale datasets should be made available via a public repository as described in the PLOS Computational Biology data availability policy, and numerical data that underlies graphs or summary statistics should be provided in spreadsheet form as supporting information.

Reviewer #1: Yes

Reviewer #2: Yes

Reviewer #3: Yes

**********

PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files.

If you choose “no”, your identity will remain anonymous but your review may still be made public.

Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy.

Reviewer #1: No

Reviewer #2: Yes: Xin Wang

Reviewer #3: No

Formally Accepted
Acceptance Letter - Natalia L. Komarova, Editor, Feng Fu, Editor

PCOMPBIOL-D-20-01822R1

Avoiding the bullies: The resilience of cooperation among unequals

Dear Dr Riedl,

I am pleased to inform you that your manuscript has been formally accepted for publication in PLOS Computational Biology. Your manuscript is now with our production department and you will be notified of the publication date in due course.

The corresponding author will soon be receiving a typeset proof for review, to ensure errors have not been introduced during production. Please review the PDF proof of your manuscript carefully, as this is the last chance to correct any errors. Please note that major changes, or those which affect the scientific understanding of the work, will likely cause delays to the publication date of your manuscript.

Soon after your final files are uploaded, unless you have opted out, the early version of your manuscript will be published online. The date of the early version will be your article's publication date. The final article will be published to the same URL, and all versions of the paper will be accessible to readers.

Thank you again for supporting PLOS Computational Biology and open-access publishing. We are looking forward to publishing your work!

With kind regards,

Alice Ellingham

PLOS Computational Biology | Carlyle House, Carlyle Road, Cambridge CB4 3DN | United Kingdom ploscompbiol@plos.org | Phone +44 (0) 1223-442824 | ploscompbiol.org | @PLOSCompBiol

Open letter on the publication of peer review reports

PLOS recognizes the benefits of transparency in the peer review process. Therefore, we enable the publication of all of the content of peer review and author responses alongside final, published articles. Reviewers remain anonymous, unless they choose to reveal their names.

We encourage other journals to join us in this initiative. We hope that our action inspires the community, including researchers, research funders, and research institutions, to recognize the benefits of published peer review reports for all parts of the research system.

Learn more at ASAPbio .