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Fig 1.

The results of the different thresholds.

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Fig 2.

The AUCs and AUPRs between different λ.

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Fig 3.

The AUPRs results of α and β.

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Fig 4.

The results of embedding dimension.

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Fig 5.

The ROC curves and PR curves for 5CV.

(A) ROC curves (B) PR curves.

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Table 1.

Performance comparison of different methods.

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Fig 6.

The CC enrichment term of genes related to breast cancer.

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Fig 7.

The relationship between the BP terms and the enriched host genes.

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Fig 8.

The MF enrichment term of genes related to breast cancer.

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Fig 9.

The flowchart of RMDGCN.

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Fig 10.

The flowchart of PU-learning.

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Fig 11.

The detailed procedures of using GCN to predict the associations between m1As and diseases.

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