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Quantifying the spatiotemporal dynamics of the first two epidemic waves of SARS-CoV-2 infections in the United States

Fig 2

Estimated infections per 100,000 of SARS-CoV-2 in the United States, March 2020–December 2021.

Panel A: Time series of SARS-CoV-2 infection estimates for the United States; the gray shaded areas show the first two large waves of infections. Panels B, C, D, and E: Sequence of the spatially smoothed estimates of SARS-CoV-2 infections per 100,000 associated with Wave 1 at 4 time points. Panels F, G, H, and I: Sequence of the spatially smoothed estimates of SARS-CoV-2 infections per 100,000 associated with Wave 2 at 4 time points. All maps were generated using United States, state, and county borderlines maps in the public domain from the Census Bureau, which were downloaded through the R package Tigris [30]. The shapefile generated for this analysis with the population estimates and cumulative infection estimates can be found at: https://github.com/covidestim/waves/tree/waves-manuscript/Data/data-products. For a more detailed visualization of each wave, see the S1-S2 Movies.

Fig 2

doi: https://doi.org/10.1371/journal.pcbi.1013983.g002