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LSTM-attention-guided graph neural networks for integrated genotype–Environment modeling in maize yield prediction

Fig 2

Overview of the proposed G × E prediction pipeline.

Genomic markers are reduced to 548 principal components and used as genotype node features. Daily weather variables are encoded via LSTM into a 21-dimensional environment embedding. These embeddings form nodes in a GNN, followed by an MLP predictor for yield estimation.

Fig 2

doi: https://doi.org/10.1371/journal.pcbi.1013729.g002