OneProt: Towards multi-modal protein foundation models via latent space alignment of sequence, structure, binding sites and text encoders
Table 4
Performance comparison of OneProt, SaProt-LoRa, SaProt, ProTrek, ESM, and OpenFold on four multi-label function prediction tasks: Enzyme Commission numbers (EC), Gene Ontology (GO) terms corresponding to Molecular Function (MF), Biological Process (BP), and Cellular Component (CC), using maximum F1-score metric (Fmax) defined by Eq (6).