Branch-specific gene discovery in cell differentiation using multi-omics graph attention
Fig 2
Accuracy of BranchKGN versus existing methods on the oRG-111 dataset.
Bar plots show the percentage of correctly identified oRG-specific genes at four ranking thresholds (Top 500, 1,000, 2,000, 5,000) for DISP, MVP, VST, scGEAToolbox, and BranchKGN. A pie chart inset indicates the proportion of known oRG-associated genes in the dataset (111 genes, 0.44%), serving as the gold-standard reference.