Effects of segmentation errors on downstream-analysis in highly-multiplexed tissue imaging
Fig 4
Effect of segmentation error on k-Means clustering.
(A) Adjusted Rand Index (ARI) scores for different numbers of clusters. (B) Aggregations of ARI scores for perturbation levels. (C) ARI scores for different numbers of clusters for variance stabilized data. (B) Aggregations of ARI scores for perturbation levels for variance stabilized data. (D) ARI scores are aggregated for the number of clusters. Error bars indicate one median absolute deviation. Colors encode either perturbation strength or the applied preprocessing.