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AI-first structural identification of pathogenic protein target interfaces

Fig 5

Data and modelling workflow.

To extract host-pathogen protein complexes from the PDB we selected all heteromers with a resolution below 5Å. We then mapped the proteins to PFAM and selected unique combinations of interacting domains to exclude redundancy in the interactions. The structure of the resulting 111 host-pathogen interactions were then predicted using the full-length sequences.

Fig 5

doi: https://doi.org/10.1371/journal.pcbi.1013168.g005