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Attenuation of HIV severity by slightly deleterious mutations can explain the long-term trajectory of virulence evolution

Fig 5

Average spVL over time in simulated epidemics.

For m = 10, short-sighted evolution leads to the rapid dominance of the fittest virus type as the single circulating variant within a few years of the epidemic. For m = 50 and m = 100, the within-host dynamics create a distinctive pattern at the population level. When epidemics start with lower viral load viruses that have a relatively long infection duration, within-host evolution leads to the emergence and transmission of fitter variants with higher viral loads. This process accelerates the population-level increase in average spVL. When we assume a large number of weakly deleterious mutations (m = 150,200,250) within-host dynamics are sufficiently slow for selection for transmission potential to influence the epidemiological dynamics and lower the average spVLs, despite the comparatively higher within-host equilibrium viral load. We observe slow cumulative changes in the average spVL, with over 100 years taken for convergence at higher values of m.

Fig 5

doi: https://doi.org/10.1371/journal.pcbi.1013131.g005