MaxComp: Predicting single-cell chromatin compartments from 3D chromosome structures
Fig 2
Selected example of model compartments predicted by MaxComp and the corresponding structures of H1-hESC Chr6
(A) The predicted compartments for structure 35, 115, 255, 361, 443 of H1-hESC Chr6 together with the input adjacency matrices of the MaxComp approach. (B) The compartment profile and 3D visualization of structure 35, 115, 255, 361, 443 of H1-hESC Chr6 colored by compartments (red in compartment A and blue in compartment B) from both experiment and the MaxComp prediction showed together with the nucleus envelope. (C) Predicted speckles (green) showed together with the single-cell examples colored compartments labeled by MaxComp and the Hi-C-based PCA.